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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: RBSB_ECOLI




SWISS-2DPAGE:  RBSB_ECOLI


RBSB_ECOLI


General information about the entry
View entry in simple text format
Entry nameRBSB_ECOLI
Primary accession numberP02925
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=D-ribose-binding periplasmic protein; Flags: Precursor;.
Gene nameName=rbsB
Synonyms=prlB, rbsP
OrderedLocusNames=b3751, JW3730
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
PubMed=12469338; [NCBI, Expasy, EBI, Israel, Japan]
Yan J.X., Devenish A.T., Wait R., Stone T., Lewis S., Fowler S.
''''''Fluorescence 2-D difference gel electrophoresis and mass spectrometry based proteomic analysis of E. coli'';'';''
Proteomics 2(1):1682-1698(2002)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI-DIGE4.5-6.5 {Escherichia coli DIGE (4.5-6.5)}
Escherichia coli
ECOLI-DIGE4.5-6.5
  map experimental info
  protein estimated location
 
ECOLI-DIGE4.5-6.5

MAP LOCATIONS:
pI=5.92; Mw=29066  [identification data]

MAPPING (identification):
Peptide mass fingerprinting and tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
ECO2DBASEH027.9; 6TH EDITION.
UniProtKB/Swiss-ProtP02925; RBSB_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRBSB_ECOLI
Primary accession numberP02925
Secondary accession number(s) Q2M869
Sequence was last modified on July 21, 1986 (version 1)
Annotations were last modified on October 19, 2011 (version 117)
Name and origin of the protein
DescriptionRecName: Full=D-ribose-binding periplasmic protein; Flags: Precursor;
Gene nameName=rbsB
Synonyms=prlB, rbsP
OrderedLocusNames=b3751, JW3730
Encoded onName=rbsB; Synonyms=prlB, rbsP; OrderedLocusNames=b3751, JW3730
Keywords3D-structure; Chemotaxis; Complete proteome; Direct protein sequencing; Periplasm; Reference proteome; Signal; Sugar transport; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLK00511; AAA50966.1; -; Genomic_DNA
EMBLM13169; AAA51475.1; -; Genomic_DNA
EMBLL10328; AAA62104.1; -; Genomic_DNA
EMBLU00096; AAC76774.1; -; Genomic_DNA
EMBLAP009048; BAE77537.1; -; Genomic_DNA
PIRA03425; JGECR; .
RefSeqNP_418207.1; NC_000913.2; .
PDB1BA2; X-ray; 2.10 A; A/B=26-296
PDB1DBP; X-ray; 2.20 A; A=26-296
PDB1DRJ; X-ray; 2.50 A; A=26-296
PDB1DRK; X-ray; 2.00 A; A=26-296
PDB1URP; X-ray; 2.30 A; A/B/C/D=26-296
PDB2DRI; X-ray; 1.60 A; A=26-296
PDB2GX6; X-ray; 1.97 A; A=26-296
PDBsum1BA2; -; .
PDBsum1DBP; -; .
PDBsum1DRJ; -; .
PDBsum1DRK; -; .
PDBsum1URP; -; .
PDBsum2DRI; -; .
PDBsum2GX6; -; .
ProteinModelPortalP02925; -; .
SMRP02925; 26-296; .
DIPDIP-10641N; -; .
IntActP02925; 8; .
MINTMINT-1244685; -; .
TCDB3.A.1.2.1; ATP-binding cassette (ABC) superfamily; .
SWISS-2DPAGEP02925; -; .
ECO2DBASEH027.9; 6TH EDITION; .
PRIDEP02925; -; .
EnsemblBacteriaEBESCT00000002546; EBESCP00000002546; EBESCG00000002079; .
EnsemblBacteriaEBESCT00000014701; EBESCP00000013992; EBESCG00000013762; .
GeneID948261; -; .
GenomeReviewsAP009048_GR; JW3730; .
GenomeReviewsU00096_GR; b3751; .
KEGGecj:JW3730; -; .
KEGGeco:b3751; -; .
EchoBASEEB0808; -; .
EcoGeneEG10815; rbsB; .
eggNOGCOG1879; -; .
GeneTreeEBGT00050000009242; -; .
HOGENOMHBG617058; -; .
OMANVAGGEM; -; .
ProtClustDBPRK10653; -; .
BioCycEcoCyc:RBSB-MONOMER; -; .
GenevestigatorP02925; -; .
GOGO:0016020; C:membrane; IDA:UniProtKB; .
GOGO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell; .
GOGO:0008643; P:carbohydrate transport; IEA:UniProtKB-KW; .
GOGO:0006935; P:chemotaxis; IEA:UniProtKB-KW; .
InterProIPR001761; Peripla_BP_Lac1; .
PfamPF00532; Peripla_BP_1; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server