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SWISS-2DPAGE

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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: RS2_ECOLI




SWISS-2DPAGE:  RS2_ECOLI


RS2_ECOLI


General information about the entry
View entry in simple text format
Entry nameRS2_ECOLI
Primary accession numberP0A7V0
Secondary accession number(s) P02351
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 6)
Name and origin of the protein
DescriptionRecName: Full=30S ribosomal protein S2;.
Gene nameName=rpsB
OrderedLocusNames=b0169, JW0164
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
PubMed=12469338; [NCBI, Expasy, EBI, Israel, Japan]
Yan J.X., Devenish A.T., Wait R., Stone T., Lewis S., Fowler S.
''''''Fluorescence 2-D difference gel electrophoresis and mass spectrometry based proteomic analysis of E. coli'';'';''
Proteomics 2(1):1682-1698(2002)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI-DIGE4.5-6.5 {Escherichia coli DIGE (4.5-6.5)}
Escherichia coli
ECOLI-DIGE4.5-6.5
  map experimental info
  protein estimated location
 
ECOLI-DIGE4.5-6.5

MAP LOCATIONS:
pI=4.83; Mw=19048  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
ECO2DBASEH027.0; 6TH EDITION.
UniProtKB/Swiss-ProtP0A7V0; RS2_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRS2_ECOLI
Primary accession numberP0A7V0
Secondary accession number(s) P02351 Q9R2E5
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on October 19, 2011 (version 75)
Name and origin of the protein
DescriptionRecName: Full=30S ribosomal protein S2;
Gene nameName=rpsB
OrderedLocusNames=b0169, JW0164
Encoded onName=rpsB; OrderedLocusNames=b0169, JW0164
Keywords3D-structure; Complete proteome; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLV00343; CAA23631.1; -; Genomic_DNA
EMBLU70214; AAB08598.1; -; Genomic_DNA
EMBLU00096; AAC73280.1; -; Genomic_DNA
EMBLAP009048; BAB96744.1; -; Genomic_DNA
PIRA02696; R3EC2; .
RefSeqNP_414711.1; NC_000913.2; .
PDB1M5G; Model; -; B=6-214
PDB1P87; EM; 11.50 A; B=2-241
PDB1VS5; X-ray; 3.46 A; B=1-241
PDB1VS7; X-ray; 3.46 A; B=1-241
PDB2AVY; X-ray; 3.46 A; B=2-241
PDB2AW7; X-ray; 3.46 A; B=2-241
PDB2GY9; EM; 15.00 A; B=6-240
PDB2GYB; EM; 15.00 A; B=6-240
PDB2I2P; X-ray; 3.22 A; B=2-240
PDB2I2U; X-ray; 3.22 A; B=2-240
PDB2QAL; X-ray; 3.21 A; B=2-241
PDB2QAN; X-ray; 3.21 A; B=2-241
PDB2QB9; X-ray; 3.54 A; B=2-241
PDB2QBB; X-ray; 3.54 A; B=2-241
PDB2QBD; X-ray; 3.30 A; B=2-241
PDB2QBF; X-ray; 3.30 A; B=2-241
PDB2QBH; X-ray; 4.00 A; B=2-241
PDB2QBJ; X-ray; 4.00 A; B=2-241
PDB2QOU; X-ray; 3.93 A; B=2-241
PDB2QOW; X-ray; 3.93 A; B=2-241
PDB2QOY; X-ray; 3.50 A; B=2-241
PDB2QP0; X-ray; 3.50 A; B=2-241
PDB2VHO; X-ray; 3.74 A; B=2-241
PDB2VHP; X-ray; 3.74 A; B=2-241
PDB2WWL; EM; 5.80 A; B=9-226
PDB2YKR; EM; 9.80 A; B=9-226
PDB2Z4K; X-ray; 4.45 A; B=2-241
PDB2Z4M; X-ray; 4.45 A; B=2-241
PDB3DF1; X-ray; 3.50 A; B=2-240
PDB3DF3; X-ray; 3.50 A; B=2-240
PDB3E1A; EM; -; B=1-241
PDB3E1C; EM; -; B=1-241
PDB3FIH; EM; 6.70 A; B=9-226
PDB3I1M; X-ray; 3.19 A; B=1-241
PDB3I1O; X-ray; 3.19 A; B=1-241
PDB3I1Q; X-ray; 3.81 A; B=1-241
PDB3I1S; X-ray; 3.81 A; B=1-241
PDB3I1Z; X-ray; 3.71 A; B=1-241
PDB3I21; X-ray; 3.71 A; B=1-241
PDB3IZV; EM; -; F=1-241
PDB3IZW; EM; -; F=1-241
PDB3J00; EM; -; B=2-241
PDB3KC4; EM; -; B=1-241
PDB3OAQ; X-ray; 3.25 A; B=9-226
PDB3OAR; X-ray; 3.25 A; B=9-226
PDB3OFA; X-ray; 3.19 A; B=9-226
PDB3OFB; X-ray; 3.19 A; B=9-226
PDB3OFO; X-ray; 3.10 A; B=9-226
PDB3OFP; X-ray; 3.10 A; B=9-226
PDB3OFX; X-ray; 3.29 A; B=9-226
PDB3OFY; X-ray; 3.29 A; B=9-226
PDB3OR9; X-ray; 3.30 A; B=1-241
PDB3ORA; X-ray; 3.30 A; B=1-241
PDB3R8N; X-ray; 3.00 A; B=9-226
PDB3R8O; X-ray; 3.00 A; B=9-226
PDBsum1M5G; -; .
PDBsum1P87; -; .
PDBsum1VS5; -; .
PDBsum1VS7; -; .
PDBsum2AVY; -; .
PDBsum2AW7; -; .
PDBsum2GY9; -; .
PDBsum2GYB; -; .
PDBsum2I2P; -; .
PDBsum2I2U; -; .
PDBsum2QAL; -; .
PDBsum2QAN; -; .
PDBsum2QB9; -; .
PDBsum2QBB; -; .
PDBsum2QBD; -; .
PDBsum2QBF; -; .
PDBsum2QBH; -; .
PDBsum2QBJ; -; .
PDBsum2QOU; -; .
PDBsum2QOW; -; .
PDBsum2QOY; -; .
PDBsum2QP0; -; .
PDBsum2VHO; -; .
PDBsum2VHP; -; .
PDBsum2WWL; -; .
PDBsum2YKR; -; .
PDBsum2Z4K; -; .
PDBsum2Z4M; -; .
PDBsum3DF1; -; .
PDBsum3DF3; -; .
PDBsum3E1A; -; .
PDBsum3E1C; -; .
PDBsum3FIH; -; .
PDBsum3I1M; -; .
PDBsum3I1O; -; .
PDBsum3I1Q; -; .
PDBsum3I1S; -; .
PDBsum3I1Z; -; .
PDBsum3I21; -; .
PDBsum3IZV; -; .
PDBsum3IZW; -; .
PDBsum3J00; -; .
PDBsum3KC4; -; .
PDBsum3OAQ; -; .
PDBsum3OAR; -; .
PDBsum3OFA; -; .
PDBsum3OFB; -; .
PDBsum3OFO; -; .
PDBsum3OFP; -; .
PDBsum3OFX; -; .
PDBsum3OFY; -; .
PDBsum3OR9; -; .
PDBsum3ORA; -; .
PDBsum3R8N; -; .
PDBsum3R8O; -; .
ProteinModelPortalP0A7V0; -; .
SMRP0A7V0; 2-241; .
IntActP0A7V0; 205; .
SWISS-2DPAGEP0A7V0; -; .
ECO2DBASEH027.0; 6TH EDITION; .
PRIDEP0A7V0; -; .
EnsemblBacteriaEBESCT00000000658; EBESCP00000000658; EBESCG00000000549; .
EnsemblBacteriaEBESCT00000016914; EBESCP00000016205; EBESCG00000015973; .
GeneID947874; -; .
GenomeReviewsAP009048_GR; JW0164; .
GenomeReviewsU00096_GR; b0169; .
KEGGecj:JW0164; -; .
KEGGeco:b0169; -; .
EchoBASEEB0894; -; .
EcoGeneEG10901; rpsB; .
eggNOGCOG0052; -; .
GeneTreeEBGT00050000011931; -; .
HOGENOMHBG736296; -; .
OMAINLYLNI; -; .
ProtClustDBPRK05299; -; .
BioCycEcoCyc:EG10901-MONOMER; -; .
GenevestigatorP0A7V0; -; .
GOGO:0022627; C:cytosolic small ribosomal subunit; IDA:EcoliWiki; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0003735; F:structural constituent of ribosome; IDA:EcoliWiki; .
GOGO:0008270; F:zinc ion binding; IDA:EcoliWiki; .
GOGO:0006412; P:translation; IDA:EcoliWiki; .
HAMAPMF_00291_B; Ribosomal_S2_B; 1; -
InterProIPR001865; Ribosomal_S2; .
InterProIPR005706; Ribosomal_S2_bac/mit/plastid; .
InterProIPR018130; Ribosomal_S2_CS; .
InterProIPR023591; Ribosomal_S2_flav_dom; .
PANTHERPTHR12534; Ribosom_S2_bac; 1; .
PfamPF00318; Ribosomal_S2; 1; .
PRINTSPR00395; RIBOSOMALS2; .
SUPFAMSSF52313; Ribosomal_S2; 1; .
TIGRFAMsTIGR01011; RpsB_bact; 1; .
PROSITEPS00962; RIBOSOMAL_S2_1; 1; .
PROSITEPS00963; RIBOSOMAL_S2_2; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server