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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P02088




SWISS-2DPAGE:  P02088


P02088


General information about the entry
View entry in simple text format
Entry nameHBB1_MOUSE
Primary accession numberP02088
integrated into SWISS-2DPAGE on September 1, 1998 (release 7)
2D Annotations were last modified onMarch 31, 2004 (version 5)
General Annotations were last modified on May 19, 2011 (version 9)
Name and origin of the protein
DescriptionRecName: Full=Hemoglobin subunit beta-1; AltName: Full=Beta-1-globin; AltName: Full=Hemoglobin beta-1 chain; AltName: Full=Hemoglobin beta-major chain;.
Gene nameName=Hbb-b1
Annotated speciesMus musculus (Mouse) [TaxID: 10090]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.
References
[1]   MAPPING ON GEL
PubMed=11680894; [NCBI, ExPASy, EBI, Israel, Japan]
Sanchez J.-C., Chiappe D., Converset V., Hoogland C., Binz P.-A., Paesano S., Appel R.D., Wang S., Sennitt M., Nolan A., Cawthorne M.A., Hochstrasser D.F.
''''''The mouse SWISS-2DPAGE database: a tool for proteomics study of diabetes and obesity'';'';''
Proteomics 1(1):136-163(2001)
2D PAGE maps for identified proteins
How to interpret a protein

BAT_MOUSE {Brown adipose tissue}
Mus musculus (Mouse)
Tissue: Brown adipose tissue
BAT_MOUSE
  map experimental info
  protein estimated location
 
BAT_MOUSE

MAP LOCATIONS:
pI=7.61; Mw=12093
pI=7.09; Mw=12056

MAPPING (identification):
GEL MATCHING WITH WAT_MOUSE [1].



ISLETS_MOUSE {Pancreatic islet cells}
Mus musculus (Mouse)
Tissue: Pancreatic islet
ISLETS_MOUSE
  map experimental info
  protein estimated location
 
ISLETS_MOUSE

MAP LOCATIONS:
pI=7.15; Mw=13208  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [1].



LIVER_MOUSE {Liver}
Mus musculus (Mouse)
Tissue: Liver
LIVER_MOUSE
  map experimental info
  protein estimated location
 
LIVER_MOUSE

MAP LOCATIONS:
pI=7.42; Mw=12642  [identification data]
pI=7.52; Mw=12100  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [1];
SPOT 2D-0014LO: MICROSEQUENCING [1].



MUSCLE_MOUSE {Gastrocnemius muscle}
Mus musculus (Mouse)
Tissue: Gastrocnemius
MUSCLE_MOUSE
  map experimental info
  protein estimated location
 
MUSCLE_MOUSE

MAP LOCATIONS:
pI=7.83; Mw=12050  [identification data]
pI=7.20; Mw=11731  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [1];
SPOT 2D-0017VC: MATCHING WITH THE MOUSE LIVER MASTER GEL [1].



WAT_MOUSE {White adipose tissue}
Mus musculus (Mouse)
Tissue: White adipose tissue
WAT_MOUSE
  map experimental info
  protein estimated location
 
WAT_MOUSE

MAP LOCATIONS:
pI=6.68; Mw=10546  [identification data]
pI=7.35; Mw=10062  [identification data]
pI=7.02; Mw=10092  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [1];
SPOT 2D-001CK9: MATCHING WITH THE MOUSE LIVER MASTER GEL [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
REPRODUCTION-2DPAGEP02088; P02088.
REPRODUCTION-2DPAGEIPI00553333; IPI00553333.
UniProtKB/Swiss-ProtP02088; HBB1_MOUSE.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameHBB1_MOUSE
Primary accession numberP02088
Secondary accession number(s) Q54AI0 Q91V86 Q9CRZ2 Q9CXH5 Q9CY12 Q9CY54 Q9R0S6
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on October 19, 2011 (version 126)
Name and origin of the protein
DescriptionRecName: Full=Hemoglobin subunit beta-1; AltName: Full=Beta-1-globin; AltName: Full=Hemoglobin beta-1 chain; AltName: Full=Hemoglobin beta-major chain;
Gene nameName=Hbb-b1
Encoded onName=Hbb-b1
Keywords3D-structure; Complete proteome; Direct protein sequencing; Heme; Iron; Metal-binding; Oxygen transport; Phosphoprotein; Polymorphism; Reference proteome; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX14061; CAA32224.1; -; Genomic_DNA
EMBLJ00413; AAA37791.1; -; Genomic_DNA
EMBLAB020013; BAA77353.1; -; mRNA
EMBLAB020015; BAA77355.1; -; mRNA
EMBLAK002258; BAB21971.1; -; mRNA
EMBLAK002394; BAB22067.1; -; mRNA
EMBLAK003096; BAB22562.1; -; mRNA
EMBLAK003472; BAB22806.1; -; mRNA
EMBLAK005442; BAB24036.1; -; mRNA
EMBLAK005490; BAB24075.1; -; mRNA
EMBLAK005496; BAB24080.1; -; mRNA
EMBLAK010873; BAB27237.1; -; mRNA
EMBLAK010902; BAB27255.1; -; mRNA
EMBLAK010980; BAB27302.1; -; mRNA
EMBLAK010981; BAB27303.1; -; mRNA
EMBLAK010991; BAB27310.1; -; mRNA
EMBLAK010993; BAB27312.1; -; mRNA
EMBLAK011006; BAB27325.1; -; mRNA
EMBLAK011013; BAB27331.1; -; mRNA
EMBLAK011016; BAB27334.1; -; mRNA
EMBLAK011027; BAB27343.1; -; mRNA
EMBLAK011033; BAB27347.1; -; mRNA
EMBLAK011050; BAB27360.1; -; mRNA
EMBLAK011052; BAB27361.1; -; mRNA
EMBLAK011053; BAB27362.1; -; mRNA
EMBLAK011057; BAB27365.1; -; mRNA
EMBLAK011067; BAB27374.1; -; mRNA
EMBLAK011069; BAB27376.1; -; mRNA
EMBLAK011075; BAB27380.1; -; mRNA
EMBLAK011077; BAB27382.1; -; mRNA
EMBLAK011083; BAB27387.1; -; mRNA
EMBLAK011102; BAB27399.1; -; mRNA
EMBLAK012551; BAB28311.1; -; mRNA
EMBLAK014364; BAB29299.1; -; mRNA
EMBLAK027903; BAC25655.1; -; mRNA
EMBLAK027904; BAC25656.1; -; mRNA
EMBLAK028067; BAC25734.1; -; mRNA
EMBLAK088149; BAC40173.1; -; mRNA
EMBLAK133714; BAE21794.1; -; mRNA
EMBLAK147001; BAE27598.1; -; mRNA
EMBLAK160629; BAE35926.1; -; mRNA
EMBLAK161021; BAE36152.1; -; mRNA
EMBLAK165490; BAE38217.1; -; mRNA
EMBLAK167615; BAE39668.1; -; mRNA
EMBLAK168412; BAE40327.1; -; mRNA
EMBLAK168477; BAE40366.1; -; mRNA
EMBLAK168562; BAE40435.1; -; mRNA
EMBLAK168584; BAE40453.1; -; mRNA
EMBLAK168819; BAE40646.1; -; mRNA
EMBLAK168826; BAE40653.1; -; mRNA
EMBLAK168846; BAE40669.1; -; mRNA
EMBLM19236; AAA37788.1; -; mRNA
EMBLM10828; AAA37786.1; -; Genomic_DNA
EMBLM10830; AAA37787.1; -; Genomic_DNA
EMBLM10829; AAA37787.1; JOINED; Genomic_DNA
EMBLM10688; AAA37790.1; -; Genomic_DNA
IPIIPI00762198; -; .
PIRA90790; HBMS; .
RefSeqNP_001188320.1; NM_001201391.1; .
RefSeqNP_032246.2; NM_008220.4; .
RefSeqXP_003084762.1; XM_003084714.1; .
RefSeqXP_003084764.1; XM_003084716.1; .
RefSeqXP_003085430.1; XM_003085382.1; .
RefSeqXP_003085431.1; XM_003085383.1; .
RefSeqXP_003085432.1; XM_003085384.1; .
RefSeqXP_003085433.1; XM_003085385.1; .
RefSeqXP_003086668.1; XM_003086620.1; .
RefSeqXP_003086669.1; XM_003086621.1; .
RefSeqXP_003086670.1; XM_003086622.1; .
RefSeqXP_003086671.1; XM_003086623.1; .
UniGeneMm.288567; -; .
UniGeneMm.470126; -; .
PDB1JEB; X-ray; 2.10 A; B/D=2-147
PDB3HRW; X-ray; 2.80 A; B/D=2-147
PDBsum1JEB; -; .
PDBsum3HRW; -; .
ProteinModelPortalP02088; -; .
SMRP02088; 2-147; .
IntActP02088; 5; .
STRINGP02088; -; .
PhosphoSiteP02088; -; .
SWISS-2DPAGEP02088; -; .
REPRODUCTION-2DPAGEIPI00553333; -; .
REPRODUCTION-2DPAGEP02088; -; .
PRIDEP02088; -; .
GeneID100503164; -; .
GeneID100503605; -; .
GeneID15129; -; .
KEGGmmu:100503164; -; .
KEGGmmu:100503605; -; .
KEGGmmu:15129; -; .
CTD100503605; -; .
CTD15129; -; .
MGIMGI:96021; Hbb-b1; .
eggNOGroNOG15646; -; .
HOVERGENHBG009709; -; .
InParanoidP02088; -; .
OrthoDBEOG4THVVF; -; .
NextBio287582; -; .
BgeeP02088; -; .
CleanExMM_HBB-B1; -; .
GenevestigatorP02088; -; .
GermOnlineENSMUSG00000052305; Mus musculus; .
GOGO:0005833; C:hemoglobin complex; IEA:InterPro; .
GOGO:0020037; F:heme binding; IEA:InterPro; .
GOGO:0019825; F:oxygen binding; IEA:InterPro; .
GOGO:0005344; F:oxygen transporter activity; IEA:UniProtKB-KW; .
InterProIPR009050; Globin-like; .
InterProIPR012292; Globin_dom; .
InterProIPR000971; Globin_subset; .
InterProIPR002337; Haemoglobin_b; .
Gene3DG3DSA:1.10.490.10; Globin_related; 1; .
PfamPF00042; Globin; 1; .
PRINTSPR00814; BETAHAEM; .
SUPFAMSSF46458; Globin_like; 1; .
PROSITEPS01033; GLOBIN; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server