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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P09147




SWISS-2DPAGE:  P09147


P09147


General information about the entry
View entry in simple text format
Entry nameGALE_ECOLI
Primary accession numberP09147
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 6)
Name and origin of the protein
DescriptionRecName: Full=UDP-glucose 4-epimerase; EC=5.1.3.2; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase;.
Gene nameName=galE
Synonyms=galD
OrderedLocusNames=b0759, JW0742
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
PubMed=12469338; [NCBI, ExPASy, EBI, Israel, Japan]
Yan J.X., Devenish A.T., Wait R., Stone T., Lewis S., Fowler S.
''''''Fluorescence 2-D difference gel electrophoresis and mass spectrometry based proteomic analysis of E. coli'';'';''
Proteomics 2(1):1682-1698(2002)
Comments
  • SUBUNIT: HOMODIMER
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI-DIGE4.5-6.5 {Escherichia coli DIGE (4.5-6.5)}
Escherichia coli
ECOLI-DIGE4.5-6.5
  map experimental info
  protein estimated location
 
ECOLI-DIGE4.5-6.5

MAP LOCATIONS:
pI=5.91; Mw=35787  [identification data]

EXPRESSION:
increase after benzoic acid treatment [1].

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
2DBase-EcoliP09147; GALE_ECOLI.
UniProtKB/Swiss-ProtP09147; GALE_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameGALE_ECOLI
Primary accession numberP09147
Secondary accession number(s) Q47493
Sequence was last modified on July 1, 1989 (version 1)
Annotations were last modified on October 19, 2011 (version 113)
Name and origin of the protein
DescriptionRecName: Full=UDP-glucose 4-epimerase; EC=5.1.3.2; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase;
Gene nameName=galE
Synonyms=galD
OrderedLocusNames=b0759, JW0742
Encoded onName=galE; Synonyms=galD; OrderedLocusNames=b0759, JW0742
Keywords3D-structure; Carbohydrate metabolism; Complete proteome; Galactose metabolism; Isomerase; NAD; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX06226; CAA29573.1; -; Genomic_DNA
EMBLU00096; AAC73846.1; -; Genomic_DNA
EMBLAP009048; BAA35421.1; -; Genomic_DNA
EMBLX51449; CAA35813.1; -; Genomic_DNA
EMBLU07867; AAB06890.1; -; Genomic_DNA
EMBLJ01613; AAA87978.1; -; Genomic_DNA
PIRS02089; XUECUG; .
RefSeqNP_415280.3; NC_000913.2; .
PDB1A9Y; X-ray; 1.80 A; A=1-338
PDB1A9Z; X-ray; 1.90 A; A=1-338
PDB1KVQ; X-ray; 2.15 A; A=1-338
PDB1KVR; X-ray; 1.90 A; A=1-338
PDB1KVS; X-ray; 2.15 A; A=1-338
PDB1KVT; X-ray; 2.15 A; A=1-338
PDB1KVU; X-ray; 1.90 A; A=1-338
PDB1LRJ; X-ray; 1.90 A; A=1-338
PDB1LRK; X-ray; 1.75 A; A=1-338
PDB1LRL; X-ray; 1.80 A; A=1-338
PDB1NAH; X-ray; 1.80 A; A=1-338
PDB1NAI; X-ray; 2.00 A; A=1-338
PDB1UDA; X-ray; 1.80 A; A=1-338
PDB1UDB; X-ray; 1.65 A; A=1-338
PDB1UDC; X-ray; 1.65 A; A=1-338
PDB1XEL; X-ray; 1.80 A; A=1-338
PDB2UDP; X-ray; 1.80 A; A/B=1-338
PDBsum1A9Y; -; .
PDBsum1A9Z; -; .
PDBsum1KVQ; -; .
PDBsum1KVR; -; .
PDBsum1KVS; -; .
PDBsum1KVT; -; .
PDBsum1KVU; -; .
PDBsum1LRJ; -; .
PDBsum1LRK; -; .
PDBsum1LRL; -; .
PDBsum1NAH; -; .
PDBsum1NAI; -; .
PDBsum1UDA; -; .
PDBsum1UDB; -; .
PDBsum1UDC; -; .
PDBsum1XEL; -; .
PDBsum2UDP; -; .
ProteinModelPortalP09147; -; .
SMRP09147; 1-338; .
DIPDIP-9728N; -; .
IntActP09147; 3; .
SWISS-2DPAGEP09147; -; .
2DBase-EcoliP09147; -; .
EnsemblBacteriaEBESCT00000004431; EBESCP00000004431; EBESCG00000003616; .
EnsemblBacteriaEBESCT00000004432; EBESCP00000004432; EBESCG00000003616; .
EnsemblBacteriaEBESCT00000004433; EBESCP00000004433; EBESCG00000003616; .
EnsemblBacteriaEBESCT00000014770; EBESCP00000014061; EBESCG00000013830; .
GeneID945354; -; .
GenomeReviewsAP009048_GR; JW0742; .
GenomeReviewsU00096_GR; b0759; .
KEGGecj:JW0742; -; .
KEGGeco:b0759; -; .
EchoBASEEB0357; -; .
EcoGeneEG10362; galE; .
eggNOGCOG1087; -; .
GeneTreeEBGT00050000008809; -; .
HOGENOMHBG755066; -; .
OMAPYQESFP; -; .
ProtClustDBPRK10675; -; .
BioCycEcoCyc:UDPGLUCEPIM-MONOMER; -; .
BioCycMetaCyc:UDPGLUCEPIM-MONOMER; -; .
GenevestigatorP09147; -; .
GOGO:0005829; C:cytosol; IDA:UniProtKB; .
GOGO:0070403; F:NAD+ binding; IDA:EcoCyc; .
GOGO:0003978; F:UDP-glucose 4-epimerase activity; IDA:EcoCyc; .
GOGO:0009242; P:colanic acid biosynthetic process; IMP:EcoCyc; .
GOGO:0033499; P:galactose catabolic process via UDP-galactose; IMP:EcoCyc; .
InterProIPR001509; Epimerase_deHydtase; .
InterProIPR005886; GalE; .
InterProIPR016040; NAD(P)-bd_dom; .
Gene3DG3DSA:3.40.50.720; NAD(P)-bd; 1; .
PANTHERPTHR10366:SF39; GalE; 1; .
PfamPF01370; Epimerase; 1; .
TIGRFAMsTIGR01179; GalE; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server