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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P22887




SWISS-2DPAGE:  P22887


P22887


General information about the entry
View entry in simple text format
Entry nameNDKC_DICDI
Primary accession numberP22887
integrated into SWISS-2DPAGE on September 1, 1997 (release 6)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 9)
Name and origin of the protein
DescriptionRecName: Full=Nucleoside diphosphate kinase, cytosolic; Short=NDK; Short=NDP kinase; EC=2.7.4.6;.
Gene nameName=ndkC-1
Synonyms=gip17, ndkB
ORFNames=DDB_G0273069
   and
Name=ndkC-2
Synonyms=gip17, ndkB
ORFNames=DDB_G0273805
Annotated speciesDictyostelium discoideum (Slime mold) [TaxID: 44689]
TaxonomyEukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.
References
[1]   MAPPING ON GEL
MEDLINE=97295287; PubMed=9150929; [NCBI, ExPASy, EBI, Israel, Japan]
Yan J.X., Tonella L., Sanchez J.-C., Wilkins M.R., Packer N.H., Gooley A.A., Hochstrasser D.F., Williams K.L.
''''''The Dictyostelium discoideum proteome--the SWISS-2DPAGE database of the multicellular aggregate (slug)'';'';''
Electrophoresis 18(1):491-497(1997)
2D PAGE maps for identified proteins
How to interpret a protein

DICTYSLUG {Dictyostelium discoideum}
Dictyostelium discoideum (Slime mold)
DICTYSLUG
  map experimental info
  protein estimated location
 
DICTYSLUG

MAP LOCATIONS:
pI=7.05; Mw=14144  [identification data]

MAPPING (identification):
AMINO ACID COMPOSITION ANALYSIS [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP22887; NDKC_DICDI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameNDKC_DICDI
Primary accession numberP22887
Secondary accession number(s) Q556V0
Sequence was last modified on August 1, 1991 (version 1)
Annotations were last modified on September 21, 2011 (version 111)
Name and origin of the protein
DescriptionRecName: Full=Nucleoside diphosphate kinase, cytosolic; Short=NDK; Short=NDP kinase; EC=2.7.4.6;
Gene nameName=ndkC-1
Synonyms=gip17, ndkB
ORFNames=DDB_G0273069
   and
Name=ndkC-2
Synonyms=gip17, ndkB
ORFNames=DDB_G0273805
Encoded onName=ndkC-1; Synonyms=gip17, ndkB; ORFNames=DDB_G0273069; and Name=ndkC-2; Synonyms=gip17, ndkB; ORFNames=DDB_G0273805
Keywords3D-structure; ATP-binding; Complete proteome; Cytoplasm; Kinase; Magnesium; Metal-binding; Nucleotide metabolism; Nucleotide-binding; Phosphoprotein; Reference proteome; Transferase.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLJ05457; AAA33231.1; -; mRNA
EMBLL23067; AAA16161.1; -; Genomic_DNA
EMBLAAFI02000011; EAL70593.1; -; Genomic_DNA
EMBLAAFI02000009; EAL70752.1; -; Genomic_DNA
PIRA49547; A49547; .
RefSeqXP_644519.1; XM_639427.1; .
RefSeqXP_644731.1; XM_639639.1; .
PDB1B4S; X-ray; 2.50 A; A/B/C=1-155
PDB1B99; X-ray; 2.70 A; A/B/C/D/E/F=1-155
PDB1BUX; X-ray; 2.80 A; A/B/C=1-155
PDB1F3F; X-ray; 1.85 A; A/B/C=1-155
PDB1F6T; X-ray; 1.92 A; A/B/C=1-155
PDB1HHQ; X-ray; 2.10 A; A=1-155
PDB1HIY; X-ray; 2.60 A; A/B/C=1-155
PDB1HLW; X-ray; 1.90 A; A=1-155
PDB1KDN; X-ray; 2.00 A; A/B/C=1-155
PDB1LEO; X-ray; 2.60 A; A=6-155
PDB1LWX; X-ray; 2.30 A; A/B/C=1-155
PDB1MN7; X-ray; 2.15 A; A/B=1-155
PDB1MN9; X-ray; 2.90 A; A/B/C=1-155
PDB1NCL; X-ray; 2.20 A; A=6-155
PDB1NDC; X-ray; 2.00 A; A=1-155
PDB1NDK; X-ray; 2.20 A; A=1-155
PDB1NDP; X-ray; 2.20 A; A/B=1-155
PDB1NPK; X-ray; 1.80 A; A=2-155
PDB1NSP; X-ray; 2.10 A; A=1-155
PDB1PAE; X-ray; 2.70 A; X=1-155
PDB1S5Z; X-ray; 2.00 A; A/B/C/D/E/F=1-155
PDB2BEF; X-ray; 2.30 A; A/B/C=1-155
PDB3FKB; X-ray; 1.65 A; A/B/C/D/E/F=1-155
PDBsum1B4S; -; .
PDBsum1B99; -; .
PDBsum1BUX; -; .
PDBsum1F3F; -; .
PDBsum1F6T; -; .
PDBsum1HHQ; -; .
PDBsum1HIY; -; .
PDBsum1HLW; -; .
PDBsum1KDN; -; .
PDBsum1LEO; -; .
PDBsum1LWX; -; .
PDBsum1MN7; -; .
PDBsum1MN9; -; .
PDBsum1NCL; -; .
PDBsum1NDC; -; .
PDBsum1NDK; -; .
PDBsum1NDP; -; .
PDBsum1NPK; -; .
PDBsum1NSP; -; .
PDBsum1PAE; -; .
PDBsum1S5Z; -; .
PDBsum2BEF; -; .
PDBsum3FKB; -; .
ProteinModelPortalP22887; -; .
SMRP22887; 5-155; .
STRINGP22887; -; .
SWISS-2DPAGEP22887; -; .
PRIDEP22887; -; .
EnsemblProtistsDDB0185051; DDB0185051; DDB_G0273069; .
EnsemblProtistsDDB0238334; DDB0238334; DDB_G0273805; .
GeneID8618831; -; .
GeneID8619145; -; .
GenomeReviewsCM000151_GR; ndkC-2; .
KEGGddi:DDB_G0273069; -; .
KEGGddi:DDB_G0273805; -; .
eggNOGKOG0888; -; .
GeneTreeEPrGT00050000004387; -; .
HOGENOMHBG445152; -; .
OMALREHYDD; -; .
PhylomeDBP22887; -; .
ProtClustDBPTZ00093; -; .
GOGO:0005856; C:cytoskeleton; IDA:dictyBase; .
GOGO:0045335; C:phagocytic vesicle; IDA:dictyBase; .
GOGO:0005886; C:plasma membrane; IDA:dictyBase; .
GOGO:0005840; C:ribosome; IPI:dictyBase; .
GOGO:0030141; C:stored secretory granule; IPI:dictyBase; .
GOGO:0005524; F:ATP binding; IDA:dictyBase; .
GOGO:0046872; F:metal ion binding; IEA:UniProtKB-KW; .
GOGO:0004550; F:nucleoside diphosphate kinase activity; IDA:dictyBase; .
GOGO:0006241; P:CTP biosynthetic process; IEA:InterPro; .
GOGO:0007010; P:cytoskeleton organization; IPI:dictyBase; .
GOGO:0006186; P:dGDP phosphorylation; IDA:dictyBase; .
GOGO:0006187; P:dGTP biosynthetic process from dGDP; IDA:dictyBase; .
GOGO:0007186; P:G-protein coupled receptor protein signaling pathway; IMP:dictyBase; .
GOGO:0006183; P:GTP biosynthetic process; IEA:InterPro; .
GOGO:0009617; P:response to bacterium; IEP:dictyBase; .
GOGO:0006414; P:translational elongation; IDA:dictyBase; .
GOGO:0006228; P:UTP biosynthetic process; IEA:InterPro; .
InterProIPR001564; Nucleoside_diP_kinase; .
InterProIPR023005; Nucleoside_diP_kinase_AS; .
Gene3DG3DSA:3.30.70.141; NDK; 1; .
PANTHERPTHR11349; Nuc_diP_kinase_core; 1; .
PfamPF00334; NDK; 1; .
PRINTSPR01243; NUCDPKINASE; .
SMARTSM00562; NDK; 1; .
SUPFAMSSF54919; NDK; 1; .
PROSITEPS00469; NDP_KINASES; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server