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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P39023




SWISS-2DPAGE:  P39023


P39023


General information about the entry
View entry in simple text format
Entry nameRL3_HUMAN
Primary accession numberP39023
integrated into SWISS-2DPAGE on November 9, 2001 (release 15)
2D Annotations were last modified onMay 15, 2003 (version 2)
General Annotations were last modified on May 19, 2011 (version 6)
Name and origin of the protein
DescriptionRecName: Full=60S ribosomal protein L3; AltName: Full=HIV-1 TAR RNA-binding protein B; Short=TARBP-B;.
Gene nameName=RPL3
ORFNames=OK/SW-cl.32
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, ExPASy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=47400  [identification data]
Mw=46437  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP39023; RL3_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRL3_HUMAN
Primary accession numberP39023
Secondary accession number(s) B2RDV9 Q15548 Q5I0G0
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on October 19, 2011 (version 123)
Name and origin of the protein
DescriptionRecName: Full=60S ribosomal protein L3; AltName: Full=HIV-1 TAR RNA-binding protein B; Short=TARBP-B;
Gene nameName=RPL3
ORFNames=OK/SW-cl.32
Encoded onName=RPL3; ORFNames=OK/SW-cl.32
KeywordsAcetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Phosphoprotein; Polymorphism; Reference proteome; Ribonucleoprotein; Ribosomal protein.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX73460; CAA51839.1; -; mRNA
EMBLAB062291; BAB93474.1; -; mRNA
EMBLCR456566; CAG30452.1; -; mRNA
EMBLAK315693; BAG38056.1; -; mRNA
EMBLAL022326; CAA18450.1; -; Genomic_DNA
EMBLBC002408; AAH02408.1; -; mRNA
EMBLBC006483; AAH06483.1; -; mRNA
EMBLBC008003; AAH08003.1; -; mRNA
EMBLBC012146; AAH12146.1; -; mRNA
EMBLBC012786; AAH12786.1; -; mRNA
EMBLBC013674; AAH13674.1; -; mRNA
EMBLBC014017; AAH14017.1; -; mRNA
EMBLBC015032; AAH15032.1; -; mRNA
EMBLBC015767; AAH15767.1; -; mRNA
EMBLBC063662; AAH63662.1; -; mRNA
EMBLBC088373; AAH88373.1; -; mRNA
EMBLBC107711; AAI07712.1; -; mRNA
EMBLM90054; AAA60291.1; -; mRNA
EMBLL22453; AAA91344.1; -; mRNA
EMBLAB007166; BAA25828.1; -; Genomic_DNA
IPIIPI00550021; -; .
PIRS34195; S34195; .
RefSeqNP_000958.1; NM_000967.3; .
UniGeneHs.119598; -; .
ProteinModelPortalP39023; -; .
SMRP39023; 1-393; .
IntActP39023; 11; .
MINTMINT-1145548; -; .
STRINGP39023; -; .
PhosphoSiteP39023; -; .
SWISS-2DPAGEP39023; -; .
PRIDEP39023; -; .
EnsemblENST00000216146; ENSP00000346001; ENSG00000100316; .
GeneID6122; -; .
KEGGhsa:6122; -; .
UCSCuc003axi.1; human; .
CTD6122; -; .
GeneCardsGC22M039708; -; .
GeneCardsGC22M039710; -; .
H-InvDBHIX0016489; -; .
HGNCHGNC:10332; RPL3; .
HPAHPA003365; -; .
MIM604163; gene; .
neXtProtNX_P39023; -; .
eggNOGprNOG11122; -; .
HOGENOMHBG297464; -; .
HOVERGENHBG001864; -; .
InParanoidP39023; -; .
OMAWGTKKLP; -; .
PhylomeDBP39023; -; .
ReactomeREACT_13698; Regulation of beta-cell development; .
ReactomeREACT_15380; Diabetes pathways; .
ReactomeREACT_17015; Metabolism of proteins; .
ReactomeREACT_1762; 3' -UTR-mediated translational regulation; .
ReactomeREACT_21257; Metabolism of RNA; .
ReactomeREACT_6167; Influenza Infection; .
ReactomeREACT_71; Gene Expression; .
NextBio23777; -; .
ArrayExpressP39023; -; .
BgeeP39023; -; .
CleanExHS_RPL3; -; .
GenevestigatorP39023; -; .
GermOnlineENSG00000100316; Homo sapiens; .
GOGO:0022625; C:cytosolic large ribosomal subunit; TAS:ProtInc; .
GOGO:0005730; C:nucleolus; IDA:HPA; .
GOGO:0003723; F:RNA binding; TAS:ProtInc; .
GOGO:0003735; F:structural constituent of ribosome; TAS:ProtInc; .
GOGO:0031018; P:endocrine pancreas development; TAS:Reactome; .
GOGO:0016071; P:mRNA metabolic process; TAS:Reactome; .
GOGO:0006414; P:translational elongation; TAS:Reactome; .
GOGO:0006415; P:translational termination; TAS:Reactome; .
GOGO:0019083; P:viral transcription; TAS:Reactome; .
InterProIPR000597; Ribosomal_L3; .
InterProIPR019926; Ribosomal_L3_CS; .
InterProIPR009000; Transl_elong_init/rib_B-barrel; .
PfamPF00297; Ribosomal_L3; 1; .
SUPFAMSSF50447; Translat_factor; 1; .
PROSITEPS00474; RIBOSOMAL_L3; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server