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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P46422




SWISS-2DPAGE:  P46422


P46422


General information about the entry
View entry in simple text format
Entry nameGSTF2_ARATH
Primary accession numberP46422
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on November 9, 2011 (version 10)
Name and origin of the protein
DescriptionRecName: Full=Glutathione S-transferase F2; Short=AtGSTF2; EC=2.5.1.18; AltName: Full=24 kDa auxin-binding protein; Short=AtPM24; AltName: Full=GST class-phi member 2;.
Gene nameName=GSTF2
Synonyms=PM24.1
OrderedLocusNames=At4g02520
ORFNames=T10P11.18
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.
Submitted (OCT-2000) to SWISS-2DPAGE
[2]   MAPPING ON GEL
MEDLINE=99155804; PubMed=10036779; [NCBI, ExPASy, EBI, Israel, Japan]
Santoni V., Rouquie D., Doumas P., Mansion M., Boutry M., Degand H., Dupree P., Packman L., Sherrier J., Prime T., Bauw G., Posada E., Rouze P., Dehais P., Sahnoun I., Barlier I., Rossignol M.
''''''Use of a proteome strategy for tagging proteins present at the plasma membrane'';'';''
Plant J. 16(1):633-641(1998)
2D PAGE maps for identified proteins
How to interpret a protein

ARABIDOPSIS {Arabidopsis thaliana}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
ARABIDOPSIS
  map experimental info
  protein estimated location
 
ARABIDOPSIS

MAP LOCATIONS:
pI=6.09; Mw=28115
pI=5.86; Mw=28024

MAPPING (identification):
GEL MATCHING [1] WITH 2-D MAP OF LEAF SOLUBLE PROTEINS FROM PPMdb DATABASE (GHENT, BELGIUM) [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP46422; GSTF2_ARATH.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameGSTF2_ARATH
Primary accession numberP46422
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on October 19, 2011 (version 105)
Name and origin of the protein
DescriptionRecName: Full=Glutathione S-transferase F2; Short=AtGSTF2; EC=2.5.1.18; AltName: Full=24 kDa auxin-binding protein; Short=AtPM24; AltName: Full=GST class-phi member 2;
Gene nameName=GSTF2
Synonyms=PM24.1
OrderedLocusNames=At4g02520
ORFNames=T10P11.18
Encoded onName=GSTF2; Synonyms=PM24.1; OrderedLocusNames=At4g02520; ORFNames=T10P11.18
Keywords3D-structure; Auxin signaling pathway; Complete proteome; Cytoplasm; Detoxification; Direct protein sequencing; Endoplasmic reticulum; Microsome; Oxidoreductase; Peroxidase; Plant defense; Reference proteome; Stress response; Transferase.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX75303; CAA53051.1; -; mRNA
EMBLL07589; AAA32800.1; -; mRNA
EMBLL11601; AAA32801.1; -; mRNA
EMBLAC002330; AAC78264.1; -; Genomic_DNA
EMBLAL161494; CAB80745.1; -; Genomic_DNA
EMBLCP002687; AEE82183.1; -; Genomic_DNA
EMBLAF324681; AAG40032.1; -; mRNA
EMBLAF326903; AAG41485.1; -; mRNA
EMBLAF349527; AAK15574.1; -; mRNA
EMBLAY039580; AAK62635.1; -; mRNA
EMBLAY056082; AAL06970.1; -; mRNA
IPIIPI00535149; -; .
PIRS35268; S35268; .
RefSeqNP_192161.1; NM_116486.2; .
UniGeneAt.22195; -; .
UniGeneAt.24972; -; .
PDB1BX9; X-ray; 2.60 A; A=2-212
PDB1GNW; X-ray; 2.20 A; A/B=2-212
PDBsum1BX9; -; .
PDBsum1GNW; -; .
ProteinModelPortalP46422; -; .
SMRP46422; 3-212; .
STRINGP46422; -; .
SWISS-2DPAGEP46422; -; .
PRIDEP46422; -; .
EnsemblPlantsAT4G02520.1; AT4G02520.1; AT4G02520; .
GeneID827931; -; .
GenomeReviewsCT486007_GR; AT4G02520; .
KEGGath:AT4G02520; -; .
NMPDRfig|3702.1.peg.18066; -; .
TAIRAt4g02520; -; .
eggNOGKOG0867; -; .
HOGENOMHBG753188; -; .
InParanoidP46422; -; .
OMAAIMAIGM; -; .
PhylomeDBP46422; -; .
ProtClustDBCLSN2679613; -; .
GenevestigatorP46422; -; .
GermOnlineAT4G02520; Arabidopsis thaliana; .
GOGO:0048046; C:apoplast; IDA:TAIR; .
GOGO:0009570; C:chloroplast stroma; IDA:TAIR; .
GOGO:0005829; C:cytosol; IDA:TAIR; .
GOGO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell; .
GOGO:0005792; C:microsome; IDA:TAIR; .
GOGO:0005886; C:plasma membrane; IDA:TAIR; .
GOGO:0009506; C:plasmodesma; IDA:TAIR; .
GOGO:0005773; C:vacuole; IDA:TAIR; .
GOGO:0043295; F:glutathione binding; IDA:TAIR; .
GOGO:0004364; F:glutathione transferase activity; IDA:TAIR; .
GOGO:0009734; P:auxin mediated signaling pathway; IEA:UniProtKB-KW; .
GOGO:0042742; P:defense response to bacterium; IEP:TAIR; .
GOGO:0050832; P:defense response to fungus; IEP:TAIR; .
GOGO:0046686; P:response to cadmium ion; IEP:TAIR; .
GOGO:0009409; P:response to cold; IEP:TAIR; .
GOGO:0009651; P:response to salt stress; IEP:TAIR; .
GOGO:0010043; P:response to zinc ion; IEP:TAIR; .
GOGO:0009407; P:toxin catabolic process; TAS:TAIR; .
InterProIPR010987; Glutathione-S-Trfase_C-like; .
InterProIPR004045; Glutathione_S-Trfase_N; .
InterProIPR017933; Glutathione_S_Trfase/Cl_chnl_C; .
InterProIPR004046; GST_C; .
InterProIPR012336; Thioredoxin-like_fold; .
Gene3DG3DSA:1.20.1050.10; GST_C_like; 1; .
Gene3DG3DSA:3.40.30.10; Thioredoxin_fold; 1; .
PfamPF00043; GST_C; 1; .
PfamPF02798; GST_N; 1; .
SUPFAMSSF47616; GST_C_like; 1; .
SUPFAMSSF52833; Thiordxn-like_fd; 1; .
PROSITEPS50405; GST_CTER; 1; .
PROSITEPS50404; GST_NTER; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server