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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: Q14103




SWISS-2DPAGE:  Q14103


Q14103


General information about the entry
View entry in simple text format
Entry nameHNRPD_HUMAN
Primary accession numberQ14103
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoprotein D0; Short=hnRNP D0; AltName: Full=AU-rich element RNA-binding protein 1;.
Gene nameName=HNRNPD
Synonyms=AUF1, HNRPD
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, ExPASy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=45031  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtQ14103; HNRPD_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameHNRPD_HUMAN
Primary accession numberQ14103
Secondary accession number(s) A8K9J2 P07029 Q01858 Q14100 Q14101 Q14102 Q4W5A1 Q9UCE8 Q9UCE9
Sequence was last modified on November 1, 1996 (version 1)
Annotations were last modified on September 21, 2011 (version 142)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoprotein D0; Short=hnRNP D0; AltName: Full=AU-rich element RNA-binding protein 1;
Gene nameName=HNRNPD
Synonyms=AUF1, HNRPD
Encoded onName=HNRNPD; Synonyms=AUF1, HNRPD
Keywords3D-structure; Acetylation; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; DNA-binding; Methylation; Nucleus; Phosphoprotein; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding; Transcription; Transcription regulation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLD55671; BAA09522.1; -; mRNA
EMBLD55672; BAA09523.1; -; mRNA
EMBLD55673; BAA09524.1; -; mRNA
EMBLD55674; BAA09525.1; -; mRNA
EMBLAF026126; AAC23474.1; -; Genomic_DNA
EMBLAF026126; AAC23475.1; -; Genomic_DNA
EMBLAF026126; AAC23476.1; -; Genomic_DNA
EMBLAK292707; BAF85396.1; -; mRNA
EMBLAC124016; AAY40913.1; -; Genomic_DNA
EMBLCH471057; EAX05874.1; -; Genomic_DNA
EMBLBC002401; AAH02401.1; -; mRNA
EMBLBC023977; AAH23977.1; -; mRNA
EMBLBC026015; AAH26015.1; -; mRNA
EMBLX03910; CAA27544.1; ALT_SEQ; mRNA
EMBLAF039575; AAB96683.1; -; mRNA
EMBLM94630; AAA35781.1; ALT_SEQ; mRNA
IPIIPI00028888; -; .
IPIIPI00220683; -; .
IPIIPI00220684; -; .
IPIIPI00220685; -; .
PIRA24016; A24016; .
PIRA44192; A44192; .
PIRB48138; B48138; .
RefSeqNP_001003810.1; NM_001003810.1; .
RefSeqNP_002129.2; NM_002138.3; .
RefSeqNP_112737.1; NM_031369.2; .
RefSeqNP_112738.1; NM_031370.2; .
UniGeneHs.480073; -; .
PDB1HD0; NMR; -; A=98-172
PDB1HD1; NMR; -; A=98-172
PDB1IQT; NMR; -; A=183-257
PDB1WTB; NMR; -; A=181-259
PDB1X0F; NMR; -; A=181-259
PDB2Z5N; X-ray; 3.20 A; B=332-355
PDBsum1HD0; -; .
PDBsum1HD1; -; .
PDBsum1IQT; -; .
PDBsum1WTB; -; .
PDBsum1X0F; -; .
PDBsum2Z5N; -; .
ProteinModelPortalQ14103; -; .
SMRQ14103; 95-260; .
IntActQ14103; 55; .
MINTMINT-5001251; -; .
STRINGQ14103; -; .
PhosphoSiteQ14103; -; .
SWISS-2DPAGEQ14103; -; .
PRIDEQ14103; -; .
EnsemblENST00000313899; ENSP00000313199; ENSG00000138668; .
GeneID3184; -; .
KEGGhsa:3184; -; .
UCSCuc003hmm.1; human; .
UCSCuc003hmn.1; human; .
UCSCuc003hmo.1; human; .
UCSCuc003hmp.1; human; .
CTD3184; -; .
GeneCardsGC04M079015; -; .
H-InvDBHIX0200634; -; .
HGNCHGNC:5036; HNRNPD; .
HPAHPA004911; -; .
MIM601324; gene; .
neXtProtNX_Q14103; -; .
PharmGKBPA162391248; -; .
PharmGKBPA29361; -; .
eggNOGprNOG09286; -; .
GeneTreeENSGT00560000076532; -; .
HOVERGENHBG002295; -; .
InParanoidQ14103; -; .
OMANEEDEGX; -; .
OrthoDBEOG49W2FZ; -; .
PhylomeDBQ14103; -; .
ReactomeREACT_1675; mRNA Processing; .
ReactomeREACT_21257; Metabolism of RNA; .
ReactomeREACT_71; Gene Expression; .
NextBio12644; -; .
PMAP-CutDBQ14103; -; .
ArrayExpressQ14103; -; .
BgeeQ14103; -; .
GenevestigatorQ14103; -; .
GermOnlineENSG00000138668; Homo sapiens; .
GOGO:0005829; C:cytosol; TAS:Reactome; .
GOGO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; NAS:UniProtKB; .
GOGO:0005654; C:nucleoplasm; TAS:Reactome; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0003723; F:RNA binding; IDA:UniProtKB; .
GOGO:0042162; F:telomeric DNA binding; IDA:UniProtKB; .
GOGO:0000398; P:nuclear mRNA splicing; via spliceosome; TAS:Reactome
GOGO:0045893; P:positive regulation of transcription; DNA-dependent; NAS:UniProtKB
GOGO:0006401; P:RNA catabolic process; TAS:ProtInc; .
GOGO:0006351; P:transcription; DNA-dependent; IEA:UniProtKB-KW
InterProIPR012956; CARG-binding_factor_N; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
Gene3DG3DSA:3.30.70.330; a_b_plait_nuc_bd; 2; .
PfamPF08143; CBFNT; 1; .
PfamPF00076; RRM_1; 2; .
SMARTSM00360; RRM; 2; .
PROSITEPS50102; RRM; 2; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server