World-2DPAGE Portal

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World-2DPAGE Portal

Two-dimensional polyacrylamide gel electrophoresis database

World-2DPAGE Portal

Search by [accession number]

[description, ID or gene]

[author names]

[spot ID / serial number]

[identification methods]

[pI / Mw range]

[combined fields]

Maps [experimental info]

[protein list]

Select Remote Interfaces

[All Interfaces]
2DBase-Ecoli
COMPLUYEAST-2DPAGE
DOSAC-COBS 2D-PAGE
KAIKO-2DDB
PROTICdb
REPRODUCTION-2DPAGE
SIENA-2DPAGE
SWISS-2DPAGE
UCD-2DPAGE
World-2DPAGE Repository

World-2DPAGE Portal is a Dynamic Portal to query simultaneously World-Wide Gel-based Proteomics Databases.

This virtual database puts together over 250 maps for 23 species, totalizing nearly 40'000 identified spots, making it the biggest gel-based proteomics dataset accessible from a single interface.

Please, before you start your queries, check the databases you wish to query from the [Select Remote Interfaces] list.

[How to use this interface]

Last statisitcs performed on: December 2011

Summary of the current content of databases available from this portal

Database	Species	Maps	Identified spots	Identified proteins	References	Release
2DBase-Ecoli	1	14	1185	723	1	2.0 (2007-10-05)
COMPLUYEAST-2DPAGE	3	16	546	169	12	1.0 (2008-01-25)
DOSAC-COBS 2D-PAGE	1	9	909	160	1	1.0 (2006-06-12)
KAIKO-2DDDB	1	116	22821	i1159	21	1.0 (2008-05-21)
PROTICdb	many	many	>1000	959	1	2.0 (2010-12-01)
REPRODUCTION-2DPAGE	2	12	4658	1442	5	6.0 (2008-12-14)
SIENA-2DPAGE	5	24	1785	487	21	5.0 (2000-06-01)
SWISS-2DPAGE	7	36	3976	1265	75	19.02 (2011-11-09)
UCD-2DPAGE	5	17	1310	616	13	6.0 (2010-04-21)
World-2DPAGE Repository	>20	>50	>7000	>5000	>30	continuously updated!

Not currently responding:

Database	Species	Maps	Identified spots	Identified proteins	References	Release
Cornea-2DPAGE	1	5	268	67	1	1.0 (2005-10-27)
Peroxisomal 2D-PAGE	1	2	135	66	0	1.0 (2006-03-05)
Plasmo2DBase	1	15	51	16	0	1.0 (2006-08-21)

Details of the current content

Species	Map	Identified spots	Identified proteins
2DBase-Ecoli
Ecoli	E.coli MG1655 (without CAS)	110	74
Ecoli	E.coli MG1655 (with CAS)	110	74
Ecoli	E.coli DH10B (Glucose)	94	43
Ecoli	E.coli DH10B after 1000 Gen. (Glucose)	94	43
Ecoli	DH10B-Adp (Galactose)	94	43
Ecoli	E.coli DH10B (Galactose)	94	43
Ecoli	E.coli DH10B 1000 Gen.-time (Glucose)	94	43
Ecoli	E.coli MG1655 (Glucose)	99	38
Ecoli	E.coli MG1655 after 1000 Gen. (Glucose)	99	38
Ecoli	MG1655-Adp (Galactose)	99	38
Ecoli	E.coli MG1655 (Galactose)	99	38
Ecoli	E.coli MG1655 1000 Gen.-time (Glucose)	99	38
Ecoli	E.coli DH10 ADP	94	43
Ecoli	E.coli DH10 GAL	94	43
COMPLUYEAST-2DPAGE
Candida albicans	Cytoplasmic extracts from hyphal forms	59	30
Candida albicans	Hyphal cell surface-associated proteins released by Exochitinase	10	4
Candida albicans	Hyphal cell surface-associated proteins released by NaOH	15	7
Candida albicans	Hyphal cell surface-associated proteins released by Quantazyme	14	3
Candida albicans	Hyphal cell surface-associated proteins released by SDS and DTT	43	21
Candida albicans	Silver-stained 2d gel of differentially expressed C. albicans proteins after macrophage interaction	74	67
Candida albicans	Candida albicans protoplast lysates	72	32
Candida albicans	Candida albicans proteins secreted by protoplasts	19	11
Candida albicans	Candida albicans cytoplasmic extracts from yeast forms	62	31
Candida albicans	Candida albicans yeast cell surface-associated proteins released by Exochitinase	10	4
Candida albicans	Candida albicans yeast cell surface-associated proteins released by NaOH	15	7
Candida albicans	Candida albicans yeast cell surface-associated proteins released by Quantazyme	13	3
Candida albicans	Candida albicans yeast cell surface-associated proteins released by SDS and DTT	46	22
Mus musculus	2-DE gel of total protein extract of murine RAW 264.7 macrophages. SYPRO Ruby staining	37	36
Saccharomyces cerevisiae	Saccharomyces cerevisiae proteins secreted by protoplasts 3 to 10	49	28
Saccharomyces cerevisiae	Saccharomyces cerevisiae proteins secreted by protoplasts 4 to 7	8	4
DOSAC-COBS 2D-PAGE
Human	Human Lymphocytes	72	49
Human	8701 BC Breast Cancer Cells	161	98
Human	HB2 Mammary cells	104	66
Human	Undifferentiated U937 cells	62	37
Human	Breast Cancer Serum	208	38
Human	Breast Cancer Tissue	53	37
Human	Undifferentiated HL60 cells	61	38
Human	Breast Cancer FNA	59	21
Human	Human Dermal Fibroblasts	129	81
KAIKO-2DDB
Silkworm	Midgut/female: 21 maps	2047	168
Silkworm	Fat body/female: 2 maps	610	158
Silkworm	Middle silkgland/male: 14 maps	1894	160
Silkworm	Middle silkgland/female: 15 maps	4614	119
Silkworm	Posterior silkgland/female: 3 maps	1094	155
Silkworm	Malpighian tube: 22 maps	4788	137
Silkworm	Ovary: 17 maps	3064	193
Silkworm	Hemolymph/male: 22 maps	4710	69
REPRODUCTION-2DPAGE
Mouse	Silver-stained mouse oocyte gel	869	380
Mouse	Phospholation state of mouse oocyte gel	90	55
Mouse	Mouse testis gel	500	313
Mouse	Mouse testis (0W) gel	321	247
Mouse	Mouse testis (1W) gel	345	260
Mouse	Mouse testis (2W) gel	348	262
Mouse	Mouse testis (3W) gel	348	262
Mouse	Mouse testis (4W) gel	349	263
Mouse	Mouse testis (Adult) gel	342	258
Human	Human Ovary Gel	231	137
Human	Silver-stained human testis gel	847	477
Human	Phospholation state of human testis gel	68	52
SIENA-2DPAGE			Statisitcs
Bos taurus (Bovine)	Bos taurus endothelial cells isolated from thoracic aorta	64	44
Bos taurus (Bovine)	Bos taurus endothelial cells isolated from thoracic duct	64	44
Bos taurus (Bovine)	Bos taurus endothelial cells isolated from inferior vena cava	64	44
Caenorhabditis elegans	Caenorhabditis elegans	18	14
Chlamydia trachomatis	81	19
Homo sapiens (Human)	177	31
Homo sapiens (Human)	Bronchoalveolar lavage fluid	142	70
Homo sapiens (Human)	Human breast ductal carcinoma	162	52
Homo sapiens (Human)	Human breast ductal histologically normal tissue	133	47
Homo sapiens (Human)	Protein profile of capacitated versus ejaculated human sperm	116	55
Homo sapiens (Human)	Dermal fibroblasts (cell layer)	128	82
Homo sapiens (Human)	Dermal fibroblasts (culture medium)	114	72
Homo sapiens (Human)	Human breast cancer cell	32	28
Neisseria meningitidis serogroup A	MENA_LMW (Neisseria meningitidis)	256	127
Neisseria meningitidis serogroup A	MENA_Z3908 (genoclouds)	14	14
Neisseria meningitidis serogroup A	MENA_Z4970 (genoclouds)	14	14
Neisseria meningitidis serogroup A	MENA_Z4970P (phosphoproteins)	109	51
Neisseria meningitidis serogroup A	MENA_Z5015 (genoclouds)	13	13
Neisseria meningitidis serogroup A	MENA_Z5074 (genoclouds)	14	14
Neisseria meningitidis serogroup A	MENA_Z5654 (genoclouds)	14	14
Neisseria meningitidis serogroup A	MENA_Z5805 (genoclouds)	14	14
Neisseria meningitidis serogroup A	MENA_Z5840 (genoclouds)	14	14
Neisseria meningitidis serogroup A	MENA_Z6344 (genoclouds)	14	14
Neisseria meningitidis serogroup A	MENA_Z6947 (genoclouds)	14	14
SWISS-2DPAGE
Homo sapiens (Human)	Colorectal adenocarcinoma cell line (DL-1)	108	70
Homo sapiens (Human)	Colorectal epithelia cells	56	40
Homo sapiens (Human)	Cerebrospinal Fluid	309	30
Homo sapiens (Human)	Erythroleukemia Cell	35	19
Homo sapiens (Human)	HepG2	98	45
Homo sapiens (Human)	HepG2 Secreted Proteins	155	25
Homo sapiens (Human)	Kidney	44	28
Homo sapiens (Human)	Liver	138	68
Homo sapiens (Human)	Soluble nuclear proteins and matrix from liver tissue	27	14
Homo sapiens (Human)	Lymphocytes	77	62
Homo sapiens (Human)	Lymphoma	60	33
Homo sapiens (Human)	Macrophage Like Cell Line	42	32
Homo sapiens (Human)	SDS-PAGE of nucleolar proteins from Human HeLa cells	89	189
Homo sapiens (Human)	2D-PAGE of nucleolar proteins from Human HeLa cells	51	44
Homo sapiens (Human)	Plasma	626	69
Homo sapiens (Human)	Platelet	41	18
Homo sapiens (Human)	Promyelocytic leukemia cells	26	17
Homo sapiens (Human)	Red blood cells	190	32
Mus musculus (Mouse)	Brown adipose tissue	85	37
Mus musculus (Mouse)	Gastrocnemius muscle	136	71
Mus musculus (Mouse)	Liver	200	107
Mus musculus (Mouse)	Soluble nuclear proteins and matrix from liver tissue	15	8
Mus musculus (Mouse)	Pancreatic islet cells	63	44
Mus musculus (Mouse)	White adipose tissue	136	76
Arabidopsis thaliana (Mouse-ear cress)	Arabidopsis thaliana / Leaf	79	57
Dictyostelium discoideum (Slime mold)	Dictyostelium discoideum	25	16
Escherichia coli	Escherichia coli	206	180
Escherichia coli	Escherichia coli(4-5)	70	33
Escherichia coli	Escherichia coli(4.5-5.5)	97	65
Escherichia coli	Escherichia coli(5-6)	106	81
Escherichia coli	Escherichia coli(5.5-6.7)	16	16
Escherichia coli	Escherichia coli(6-9)	2	2
Escherichia coli	Escherichia coli(6-11)	34	31
Escherichia coli	Escherichia coli DIGE (4.5-6.5)	174	153
Saccharomyces cerevisiae (Baker's yeast)	Saccharomyces cerevisiae	101	62
Staphylococcus aureus (strain N315)	Staphylococcus aureus	250	198
UCD-2DPAGE			Statisitcs
Canis familiaris (Dog)	Harefield Dog Heart Ventricle	75	43
Homo sapiens (Human)	Human Brain DLPFC pH 6-11	226	149
Homo sapiens (Human)	Dorsolateral Pre Frontal Cortex White Matter Human Post Mortem Brain	46	35
Homo sapiens (Human)	3-10NL IPG Heart	59	41
Homo sapiens (Human)	4.5-5.5L IPG Human Heart	74	29
Homo sapiens (Human)	4-5L IPG Human Heart	29	9
Homo sapiens (Human)	4-7L IPG Human Heart	67	34
Homo sapiens (Human)	5.5-6.7L IPG Human Heart	53	37
Homo sapiens (Human)	5-6L IPG Human Heart	22	19
Homo sapiens (Human)	6-9L IPG Human Heart	53	34
Homo sapiens (Human)	Whole human heart, pH 6-11 IPG, bridge loading)	164	148
Homo sapiens (Human)	Harefield Human Endothelial Cell (EA.hy 926)	45	18
Homo sapiens (Human)	Harefield Human Heart Ventricle)	133	54
Mus musculus (Mouse)	Double transgenic G93A SOD1/hHSP27 mouse spinal cord, pH 4-7 DIGE Image	100	119
Rattus norvegicus (Rat)	Harefield Rat Heart Ventricle	22	17
Saccharomyces cerevisiae (Baker's yeast)	Saccharomyces cerevisiae proteins in meiosis (pH 4-7)	63	54
Saccharomyces cerevisiae (Baker's yeast)	Saccharomyces cerevisiae proteins in meiosis (pH 6-11)	79	91
World-2DPAGE Repository			Statisitcs
Apis mellifera carnica	Apis mellifera workerbee hemolymph	164	63
Arabidopsis thaliana	Arabidopsis thaliana leaf proteome, TCA-Acetone	29	24
Arabidopsis thaliana	Arabidopsis thaliana leaf proteome, Phenol	29	24
Arabidopsis thaliana	Arabidopsis thaliana leaf proteome, TCA-Acetone-Phenol	30	25
Bos taurus (Bovine)	Bovine placenta proteome, pH 4-7	130	92
Bos taurus (Bovine)	Bovine placenta proteome, pH 6-9	143	99
Botryotinia fuckeliana (strain B05.10)	051207 CMC1 Coom Botrytis cinerea mycelium cultured in carboxymethyl cellulose	267	274
Caenorhabditis elegans	C. elegans proteome after infection with Aeromonas hydrophila	76	69
Caenorhabditis elegans	C. elegans proteome after infection with Staphylococcus aureus	130	111
Corynebacterium glutamicum ATCC14067	Cytoplasmic protein extact from cells of Corynebacterium glutamicum ATCC14067, pH 4.5-5.5	137	124
Corynebacterium glutamicum ATCC14067	Cytoplasmic protein extact from cells of Corynebacterium glutamicum ATCC14067, pH 5-6	29	27
Flavobacterium columnare ATCC 49512	Flavobacterium columnare proteome, pH 3-10	181	141
Homo sapiens (Human)	Multiple Myeloma plasma sample, pH 3-10	182	138
Homo sapiens (Human)	Multiple Myeloma plasma sample, pH 4-7	311	216
Mus musculus (Mouse)	Mouse embryonic stem cells overexpressing Runx1, Day 7	55	54
Nicotiana tabacum (Common tobacco)	Nicotiana tabacum Bright-Yellow-2 (BY2) culture cells	766	559
Phakopsora pachyrhizi	Phakopsora pachyrhizi urediniospore	122	144
Pseudomonas putida UW4	Pseudomonas putida UW4	325	283
Rattus norvegicus	Cerebellum proteome	292	279
Rattus norvegicus	Olfactory bulb proteome	227	191
Rattus norvegicus	Hippocampal synaptoproteome	404	174
Staphylococcus aureus (strain Mu50 / ATCC 700699)	Staphylococcus aureus, pH 4-7	804	657
Staphylococcus aureus (strain Mu50 / ATCC 700699)	Staphylococcus aureus, pH 6-11	161	142
Tannerella forsythia	Outer membrane proteome of T. forsythia	142	65
Vigna mungo	Salicylic acid treated gel of cultivar T9 pH3-10	29	25
...	...	...	...
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World-2DPAGE Portal

Portal constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server

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