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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0002]' for entry matching: Q99SI9_STAAM World-2DPAGE Repository (0002):  Q99SI9_STAAM Q99SI9_STAAM General information about the entry View entry in simple text format Entry name Q99SI9_STAAM Primary accession number Q99SI9 integrated into World-2DPAGE Repository (0002) on  December 7, 2005 (release 1) 2D Annotations were last modified on May 1, 2011 (version 2) General Annotations were last modified on  November 14, 2011 (version 2) Name and origin of the protein Description SubName: Full=Similar to RNA binding protein, contains S1 domain;. Gene name OrderedLocusNames=SAV2063 Annotated species Staphylococcus aureus (strain Mu50 / ATCC 700699) [TaxID: 158878] Taxonomy Bacteria; Firmicutes; Bacillales; Staphylococcus. References [1]   MAPPING ON GEL PubMed=17370256; DOI=10.1002/pmic.200600925; [NCBI, EBI, Israel, Japan] Plikat U., Voshol H., Dangendorf Y., Wiedmann B., Devay P., Mueller D., Wirth U., Szustakowski J., Chirn G.W., Inverardi B., Puyang X., Brown K., Kamp H., Hoving S., Ruchti A., Brendlen N., Peterson R., Buco J., Oostrum J., Peitsch M.C. ''From proteomics to systems biology of bacterial pathogens: approaches, tools, and applications'' Proteomics 7(6):992-1003 (2007) 2D PAGE maps for identified proteins How to interpret a protein STAPHY4-7 {Staphylococcus aureus, pH 4-7} Staphylococcus aureus (strain Mu50 / ATCC 700699)   map experimental info   STAPHY4-7 MAP LOCATIONS: SPOT 628: pI=6.36; Mw=81000   [identification data] SPOT 634: pI=6.54; Mw=80000   [identification data] SPOT 639: pI=6.45; Mw=80000   [identification data] AREA: SPOT 628: 488 [1] SPOT 634: 328 [1]; SPOT 639: 912 [1]. PEAK HEIGHT: SPOT 628: 9516.042 [1] SPOT 634: 7979.819 [1]; SPOT 639: 15639.794 [1]. STAPH_LSI: SPOT 628: stapha_lsi_2063 [1] SPOT 634: stapha_lsi_2063 [1]; SPOT 639: stapha_lsi_2063 [1]. MAPPING (identification): SPOT 628: Peptide mass fingerprinting [1]; SPOT 634: Peptide mass fingerprinting [1]; SPOT 639: Peptide mass fingerprinting [1]. Copyright Data from Dr. Hans Voshol, Novartis Institutes for BioMedical Research, Basel, Switzerland Cross-references UniProtKB/TrEMBL Q99SI9; Q99SI9_STAAM. World-2DPAGE Repository Q99SI9; Q99SI9_STAAM. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/TrEMBL Extracted from UniProtKB/TrEMBL, release: 2011_10 Entry name Q99SI9_STAAM Primary accession number Q99SI9 Sequence was last modified on  June 1, 2001 (version 1) Annotations were last modified on  September 21, 2011 (version 54) Name and origin of the protein Description SubName: Full=Similar to RNA binding protein, contains S1 domain; Gene name OrderedLocusNames=SAV2063 Encoded on OrderedLocusNames=SAV2063 Keywords Complete proteome. Cross-references EMBL BA000017; BAB58225.1; -; Genomic_DNA PIR E89998; E89998; . RefSeq NP_372587.1; NC_002758.2; . HSSP P05055; 1SRO; . ProteinModelPortal Q99SI9; -; . STRING Q99SI9; -; . World-2DPAGE 0002:Q99SI9; -; . EnsemblBacteria EBSTAT00000006531; EBSTAP00000006349; EBSTAG00000006530; . GeneID 1122080; -; . GenomeReviews BA000017_GR; SAV2063; . KEGG sav:SAV2063; -; . eggNOG COG2183; -; . GeneTree EBGT00050000024038; -; . HOGENOM HBG285811; -; . OMA YKQKRRT; -; . ProtClustDB CLSK2391088; -; . BioCyc SAUR158878:SAV2063-MONOMER; -; . GO GO:0016788; F:hydrolase activity; acting on ester bonds; IEA:InterPro GO GO:0003723; F:RNA binding; IEA:InterPro; . GO GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro; . InterPro IPR012340; NA-bd_OB-fold; . InterPro IPR016027; NA-bd_OB-fold-like; . InterPro IPR003029; Rbsml_prot_S1_RNA-bd_dom; . InterPro IPR022967; RNA-binding_domain_S1; . InterPro IPR023323; Tex-like_dom; . InterPro IPR023319; Tex-like_HTH_dom; . InterPro IPR018974; Tex-like_N; . InterPro IPR023097; Tex_RuvX-like_dom; . InterPro IPR006641; YqgF/RNaseH-like_dom; . Gene3D G3DSA:1.10.10.650; G3DSA:1.10.10.650; 1; . Gene3D G3DSA:1.10.150.310; G3DSA:1.10.150.310; 1; . Gene3D G3DSA:1.10.3500.10; G3DSA:1.10.3500.10; 2; . Gene3D G3DSA:2.40.50.140; OB_NA_bd_sub; 1; . Gene3D G3DSA:3.30.420.140; Resolv_Hlld_junc_YqgF-like; 1; . Pfam PF00575; S1; 1; . Pfam PF09371; Tex_N; 1; . SMART SM00316; S1; 1; . SMART SM00732; YqgFc; 1; . SUPFAM SSF50249; Nucleic_acid_OB; 1; . PROSITE PS50126; S1; 1; . World-2DPAGE Repository (search AC)