World-2DPAGE Home


SWISS-2DPAGE 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     

Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: RS5_HUMAN




SWISS-2DPAGE:  RS5_HUMAN


RS5_HUMAN


General information about the entry
View entry in simple text format
Entry nameRS5_HUMAN
Primary accession numberP46782
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 4)
Name and origin of the protein
DescriptionRecName: Full=40S ribosomal protein S5; Contains: RecName: Full=40S ribosomal protein S5, N-terminally processed;.
Gene nameName=RPS5
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, ExPASy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=24909  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from license@isb-sib.ch).
Cross-references
UniProtKB/Swiss-ProtP46782; RS5_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRS5_HUMAN
Primary accession numberP46782
Secondary accession number(s) B2R4T2 Q96BN0
Sequence was last modified on January 23, 2007 (version 4)
Annotations were last modified on October 19, 2011 (version 114)
Name and origin of the protein
DescriptionRecName: Full=40S ribosomal protein S5; Contains: RecName: Full=40S ribosomal protein S5, N-terminally processed;
Gene nameName=RPS5
Encoded onName=RPS5
KeywordsAcetylation; Complete proteome; Direct protein sequencing; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLU14970; AAA85658.1; -; mRNA
EMBLAB061853; BAB79493.1; -; Genomic_DNA
EMBLAK311938; BAG34879.1; -; mRNA
EMBLCH471135; EAW72581.1; -; Genomic_DNA
EMBLBC015405; AAH15405.1; -; mRNA
EMBLBC018151; AAH18151.1; -; mRNA
EMBLAB007149; BAA25815.1; -; Genomic_DNA
IPIIPI00008433; -; .
PIRS55916; S55916; .
RefSeqNP_001000.2; NM_001009.3; .
UniGeneHs.378103; -; .
ProteinModelPortalP46782; -; .
SMRP46782; 17-204; .
IntActP46782; 6; .
MINTMINT-1142463; -; .
STRINGP46782; -; .
PhosphoSiteP46782; -; .
SWISS-2DPAGEP46782; -; .
PeptideAtlasP46782; -; .
PRIDEP46782; -; .
EnsemblENST00000196551; ENSP00000196551; ENSG00000083845; .
GeneID6193; -; .
KEGGhsa:6193; -; .
UCSCuc002qsn.1; human; .
CTD6193; -; .
GeneCardsGC19P055207; -; .
H-InvDBHIX0019487; -; .
HGNCHGNC:10426; RPS5; .
MIM603630; gene; .
neXtProtNX_P46782; -; .
PharmGKBPA34841; -; .
eggNOGprNOG13561; -; .
HOGENOMHBG297325; -; .
HOVERGENHBG028547; -; .
InParanoidP46782; -; .
OMASVPKAVD; -; .
OrthoDBEOG4H9XMF; -; .
PhylomeDBP46782; -; .
ReactomeREACT_13698; Regulation of beta-cell development; .
ReactomeREACT_15380; Diabetes pathways; .
ReactomeREACT_17015; Metabolism of proteins; .
ReactomeREACT_1762; 3' -UTR-mediated translational regulation; .
ReactomeREACT_21257; Metabolism of RNA; .
ReactomeREACT_6167; Influenza Infection; .
ReactomeREACT_71; Gene Expression; .
NextBio24049; -; .
ArrayExpressP46782; -; .
BgeeP46782; -; .
CleanExHS_RPS5; -; .
GenevestigatorP46782; -; .
GermOnlineENSG00000083845; Homo sapiens; .
GOGO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB; .
GOGO:0003729; F:mRNA binding; IDA:UniProtKB; .
GOGO:0003735; F:structural constituent of ribosome; IDA:UniProtKB; .
GOGO:0031018; P:endocrine pancreas development; TAS:Reactome; .
GOGO:0016071; P:mRNA metabolic process; TAS:Reactome; .
GOGO:0006450; P:regulation of translational fidelity; IGI:UniProtKB; .
GOGO:0006414; P:translational elongation; TAS:Reactome; .
GOGO:0006413; P:translational initiation; IC:UniProtKB; .
GOGO:0006415; P:translational termination; TAS:Reactome; .
GOGO:0019083; P:viral transcription; TAS:Reactome; .
InterProIPR000235; Ribosomal_S7; .
InterProIPR020606; Ribosomal_S7_CS; .
InterProIPR023798; Ribosomal_S7_dom; .
InterProIPR005716; Ribosomal_S7_euk/arc; .
Gene3DG3DSA:1.10.455.10; Ribosomal_S7; 1; .
PANTHERPTHR11205; Ribosomal_S7; 1; .
PANTHERPTHR11205:SF1; Ribosomal_S7e/a; 1; .
PfamPF00177; Ribosomal_S7; 1; .
PIRSFPIRSF002122; RPS7p_RPS7a_RPS5e_RPS7o; 1; .
SUPFAMSSF47973; Ribosomal_S7; 1; .
TIGRFAMsTIGR01028; S7_S5_E_A; 1; .
PROSITEPS00052; RIBOSOMAL_S7; 1; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server