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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: O03042




SWISS-2DPAGE:  O03042


O03042


General information about the entry
View entry in simple text format
Entry nameRBL_ARATH
Primary accession numberO03042
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=Ribulose bisphosphate carboxylase large chain; Short=RuBisCO large subunit; EC=4.1.1.39; Flags: Precursor;.
Gene nameName=rbcL
OrderedLocusNames=AtCg00490
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.
Submitted (OCT-2000) to SWISS-2DPAGE
[2]   MAPPING ON GEL
MEDLINE=99155804; PubMed=10036779; [NCBI, ExPASy, EBI, Israel, Japan]
Santoni V., Rouquie D., Doumas P., Mansion M., Boutry M., Degand H., Dupree P., Packman L., Sherrier J., Prime T., Bauw G., Posada E., Rouze P., Dehais P., Sahnoun I., Barlier I., Rossignol M.
''''''Use of a proteome strategy for tagging proteins present at the plasma membrane'';'';''
Plant J. 16(1):633-641(1998)
2D PAGE maps for identified proteins
How to interpret a protein

ARABIDOPSIS {Arabidopsis thaliana}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
ARABIDOPSIS
  map experimental info
  protein estimated location
 
ARABIDOPSIS

MAP LOCATIONS:
pI=5.71; Mw=50864  [identification data]
pI=5.64; Mw=51074  [identification data]
pI=5.78; Mw=51284  [identification data]
pI=6.15; Mw=47034  [identification data]
pI=6.10; Mw=43852  [identification data]
pI=6.02; Mw=33897  [identification data]
pI=5.92; Mw=32050  [identification data]
pI=5.55; Mw=30287  [identification data]
pI=5.79; Mw=29705  [identification data]
pI=5.79; Mw=29370  [identification data]

MAPPING (identification):
MASS SPECTROMETRY [2];
SPOT 2D-001K6O: GEL MATCHING [1] WITH 2-D MAP OF LEAF SOLUBLE PROTEINS FROM PPMdb DATABASE (GHENT, BELGIUM) [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from license@isb-sib.ch).
Cross-references
UniProtKB/Swiss-ProtO03042; RBL_ARATH.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRBL_ARATH
Primary accession numberO03042
Sequence was last modified on July 1, 1997 (version 1)
Annotations were last modified on September 21, 2011 (version 103)
Name and origin of the protein
DescriptionRecName: Full=Ribulose bisphosphate carboxylase large chain; Short=RuBisCO large subunit; EC=4.1.1.39; Flags: Precursor;
Gene nameName=rbcL
OrderedLocusNames=AtCg00490
Encoded onPlastid; Chloroplast
KeywordsAcetylation; Calvin cycle; Carbon dioxide fixation; Chloroplast; Complete proteome; Disulfide bond; Lyase; Magnesium; Metal-binding; Methylation; Monooxygenase; Oxidoreductase; Phosphoprotein; Photorespiration; Photosynthesis; Plastid; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLU91966; AAB68400.1; -; Genomic_DNA
EMBLAP000423; BAA84393.1; -; Genomic_DNA
EMBLAB003522; BAA20946.1; -; Genomic_DNA
EMBLD88901; BAA19595.1; -; Genomic_DNA
IPIIPI00535114; -; .
RefSeqNP_051067.1; NC_000932.1; .
ProteinModelPortalO03042; -; .
SMRO03042; 18-473; .
IntActO03042; 1; .
STRINGO03042; -; .
SWISS-2DPAGEO03042; -; .
PRIDEO03042; -; .
ProMEXO03042; -; .
EnsemblPlantsATCG00490.1; ATCG00490.1; ATCG00490; .
GeneID844754; -; .
GenomeReviewsAP000423_GR; ATCG00490; .
KEGGath:ArthCp030; -; .
NMPDRfig|3702.1.peg.29; -; .
TAIRAtCg00490; -; .
eggNOGCOG1850; -; .
HOGENOMHBG405441; -; .
ProtClustDBCHL00040; -; .
GenevestigatorO03042; -; .
GermOnlineATCG00490; Arabidopsis thaliana; .
GOGO:0009507; C:chloroplast; IEA:UniProtKB-SubCell; .
GOGO:0000287; F:magnesium ion binding; IEA:InterPro; .
GOGO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW; .
GOGO:0016984; F:ribulose-bisphosphate carboxylase activity; IEA:EC; .
GOGO:0009853; P:photorespiration; IEA:UniProtKB-KW; .
GOGO:0019253; P:reductive pentose-phosphate cycle; IEA:UniProtKB-KW; .
HAMAPMF_01338; RuBisCO_L_type1; 1; -
InterProIPR020878; RuBisCo_large_chain_AS; .
InterProIPR020888; RuBisCO_lsu; .
InterProIPR000685; RuBisCO_lsu_C; .
InterProIPR017443; RuBisCO_lsu_fd_N; .
InterProIPR017444; RuBisCO_lsu_N; .
Gene3DG3DSA:3.20.20.110; RuBisCO_large; 1; .
Gene3DG3DSA:3.30.70.150; RuBisCO_large; 1; .
PfamPF00016; RuBisCO_large; 1; .
PfamPF02788; RuBisCO_large_N; 1; .
SUPFAMSSF51649; RuBisCO_large; 1; .
SUPFAMSSF54966; RuBisCO_large; 1; .
PROSITEPS00157; RUBISCO_LARGE; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server