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Protein list for World-2DPAGE Repository [0043] MMUSCULUS_HL-1PHO_4-7 
mouse HL-1 cultured cardiomyocytes hydrophobic extraction  {Mus musculus (Mouse)}
tissue: Cardiac myocyte


(map ID: submission_0043:MMUSCULUS_HL-1PHO_4-7)
Release: 4 -- 18 April 2012

(local documents: preparation  / informatics )


Protein list for mmusculus_hl-1pho_4-7   32 identified spots / 28 protein entries

Gene Name Description Accession n° Spot ID Exp Mw Mapping Methods Comment Topics References
Arpc5 RecName: Full=Actin-related protein 2/3 complex subunit 5; AltName: Full=Arp2/3 complex 16 kDa subunit; Short=p16-ARC; Q9CPW4
(ARPC5_MOUSE)
pho10
16'335
{MS/MS}
geneid, score, search engine,%cov
1
Bag2 RecName: Full=BAG family molecular chaperone regulator 2; Short=BAG-2; AltName: Full=Bcl-2-associated athanogene 2; Q91YN9
(BAG2_MOUSE)
pho21
23'630
{MS/MS}
geneid, score, search engine,%cov
1
Cnn3 RecName: Full=Calponin-3; AltName: Full=Calponin, acidic isoform; Q9DAW9
(CNN3_MOUSE)
pho43
36'577
{MS/MS}
geneid, score, search engine,%cov
1
Commd3 RecName: Full=COMM domain-containing protein 3; AltName: Full=Bmi-1 upstream gene protein; Short=Bup protein; Q63829
(COMD3_MOUSE)
pho36
22'308
{MS/MS}
geneid, score, search engine,%cov
1
Cops4 RecName: Full=COP9 signalosome complex subunit 4; Short=SGN4; Short=Signalosome subunit 4; AltName: Full=JAB1-containing signalosome subunit 4; O88544
(CSN4_MOUSE)
pho42
46'541
{MS/MS}
geneid, score, search engine,%cov
1
Eef1b RecName: Full=Elongation factor 1-beta; Short=EF-1-beta; O70251
(EF1B_MOUSE)
pho38
24'849
{MS/MS}
geneid, score, search engine,%cov
1
Grb2 RecName: Full=Growth factor receptor-bound protein 2; AltName: Full=Adapter protein GRB2; AltName: Full=SH2/SH3 adapter GRB2; Q60631
(GRB2_MOUSE)
pho20
25'336
{MS/MS}
geneid, score, search engine,%cov
1
Hnrnph1 RecName: Full=Heterogeneous nuclear ribonucleoprotein H; Short=hnRNP H; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein H, N-terminally processed; O35737
(HNRH1_MOUSE)
pho7
pho4
49'454
49'454
{MS/MS}
{MS/MS}
geneid, score, search engine,%cov
geneid, score, search engine,%cov
1
1
Hspa5 RecName: Full=78 kDa glucose-regulated protein; Short=GRP-78; AltName: Full=Heat shock 70 kDa protein 5; AltName: Full=Immunoglobulin heavy chain-binding protein; Short=BiP; Flags: Precursor; P20029
(GRP78_MOUSE)
pho28
72'492
{MS/MS}
geneid, score, search engine,%cov
1
Hspa8 RecName: Full=Heat shock cognate 71 kDa protein; AltName: Full=Heat shock 70 kDa protein 8; P63017
(HSP7C_MOUSE)
pho1
73'768
{MS/MS}
geneid, score, search engine,%cov
1
Hspb1 RecName: Full=Heat shock protein beta-1; Short=HspB1; AltName: Full=Growth-related 25 kDa protein; AltName: Full=Heat shock 25 kDa protein; Short=HSP 25; AltName: Full=Heat shock 27 kDa protein; Short=HSP 27; AltName: Full=p25; P14602
(HSPB1_MOUSE)
pho32
23'057
{MS/MS}
geneid, score, search engine,%cov
1
Hspd1 RecName: Full=60 kDa heat shock protein, mitochondrial; AltName: Full=60 kDa chaperonin; AltName: Full=Chaperonin 60; Short=CPN60; AltName: Full=HSP-65; AltName: Full=Heat shock protein 60; Short=HSP-60; Short=Hsp60; AltName: Full=Mitochondrial matrix protein P1; Flags: Precursor; P63038
(CH60_MOUSE)
pho27
61'088
{MS/MS}
geneid, score, search engine,%cov
1
Myh6 RecName: Full=Myosin-6; AltName: Full=Myosin heavy chain 6; AltName: Full=Myosin heavy chain, cardiac muscle alpha isoform; Short=MyHC-alpha; Q02566
(MYH6_MOUSE)
pho26
51'854
{MS/MS}
geneid, score, search engine,%cov
1
Myl9 RecName: Full=Myosin regulatory light polypeptide 9; AltName: Full=Myosin regulatory light chain 2, smooth muscle isoform; AltName: Full=Myosin regulatory light chain 9; Q9CQ19
(MYL9_MOUSE)
pho24
19'898
{MS/MS}
geneid, score, search engine,%cov
1
Ndrg1 RecName: Full=Protein NDRG1; AltName: Full=N-myc downstream-regulated gene 1 protein; Short=Protein Ndr1; Q62433
(NDRG1_MOUSE)
pho6
43'437
{MS/MS}
geneid, score, search engine,%cov
1
Ndufv2 RecName: Full=NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; AltName: Full=NADH-ubiquinone oxidoreductase 24 kDa subunit; Flags: Precursor; Q9D6J6
(NDUV2_MOUSE)
pho35
27'640
{MS/MS}
geneid, score, search engine,%cov
1
Pcna RecName: Full=Proliferating cell nuclear antigen; Short=PCNA; AltName: Full=Cyclin; P17918
(PCNA_MOUSE)
pho15
29'108
{MS/MS}
geneid, score, search engine,%cov
1
Pdha1 RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial; EC=1.2.4.1; AltName: Full=PDHE1-A type I; Flags: Precursor; P35486
(ODPA_MOUSE)
pho30
43'888
{MS/MS}
geneid, score, search engine,%cov
1
Phb RecName: Full=Prohibitin; AltName: Full=B-cell receptor-associated protein 32; Short=BAP 32; P67778
(PHB_MOUSE)
pho19
29'859
{MS/MS}
geneid, score, search engine,%cov
1
Prdx4 RecName: Full=Peroxiredoxin-4; EC=1.11.1.15; AltName: Full=Antioxidant enzyme AOE372; AltName: Full=Peroxiredoxin IV; Short=Prx-IV; AltName: Full=Thioredoxin peroxidase AO372; AltName: Full=Thioredoxin-dependent peroxide reductase A0372; Flags: Precursor; O08807
(PRDX4_MOUSE)
pho29
31'261
{MS/MS}
geneid, score, search engine,%cov
1
Rplp0 RecName: Full=60S acidic ribosomal protein P0; AltName: Full=60S ribosomal protein L10E; P14869
(RLA0_MOUSE)
pho12
34'366
{MS/MS}
geneid, score, search engine,%cov
1
Ruvbl2 RecName: Full=RuvB-like 2; EC=3.6.4.12; AltName: Full=p47 protein; Q9WTM5
(RUVB2_MOUSE)
pho5
51'252
{MS/MS}
geneid, score, search engine,%cov
1
Timm50 RecName: Full=Mitochondrial import inner membrane translocase subunit TIM50; Flags: Precursor; Q9D880
(TIM50_MOUSE)
pho8
39'980
{MS/MS}
geneid, score, search engine,%cov
1
Tpm1 RecName: Full=Tropomyosin alpha-1 chain; AltName: Full=Alpha-tropomyosin; AltName: Full=Tropomyosin-1; P58771
(TPM1_MOUSE)
pho16
pho14
32'718
32'718
{MS/MS}
{MS/MS}
geneid, score, search engine,%cov
geneid, score, search engine,%cov
1
1
Uchl5 RecName: Full=Ubiquitin carboxyl-terminal hydrolase isozyme L5; Short=UCH-L5; EC=3.4.19.12; AltName: Full=Ubiquitin C-terminal hydrolase UCH37; AltName: Full=Ubiquitin thioesterase L5; Q9WUP7
(UCHL5_MOUSE)
pho31
37'878
{MS/MS}
geneid, score, search engine,%cov
1
Vdac2 RecName: Full=Voltage-dependent anion-selective channel protein 2; Short=VDAC-2; Short=mVDAC2; AltName: Full=Outer mitochondrial membrane protein porin 2; AltName: Full=Voltage-dependent anion-selective channel protein 6; Short=VDAC-6; Short=mVDAC6; Q60930
(VDAC2_MOUSE)
pho18
pho17
32'340
32'502
{MS/MS}
{MS/MS}
geneid, score, search engine,%cov
geneid, score, search engine,%cov
1
1
Vim RecName: Full=Vimentin; P20152
(VIME_MOUSE)
pho41
pho13
53'712
53'712
{MS/MS}
{MS/MS}
geneid, score, search engine,%cov
geneid, score, search engine,%cov
1
1
Ywhaz RecName: Full=14-3-3 protein zeta/delta; AltName: Full=Protein kinase C inhibitor protein 1; Short=KCIP-1; AltName: Full=SEZ-2; P63101
(1433Z_MOUSE)
pho39
27'925
{MS/MS}
geneid, score, search engine,%cov
1
Mapping legends: { MS/MS } => 'Tandem mass spectrometry'



Cited references

# PubMed/Medline Authors Location
[1] - Sun Z., Biela L.M., Hamilton K.L., Reardon K.F.; Journal of Proteomics 0(0):0-0 (2012).
''Concentration-dependent effects of the soy phytoestrogen genistein on the proteome of cultured cardiomyocytes'';


Gel experimental information

Information Type Data
Map name MMUSCULUS_HL-1PHO_4-7 {mouse HL-1 cultured cardiomyocytes hydrophobic extraction}
Dimension 1-D
Related documents (local documents: preparation  / informatics )
species Mus musculus (Mouse) / TaxID:10090
Tissue (Swiss-Prot definition) Cardiac myocyte
Mw start: undefined - end:
Number of detected spots 1100
Number of identified spots 32
Number of identified proteins 28
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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server