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World-2DPAGE List

Attention: World-2DPAGE is no longer maintained. Previously submitted data can still be queried at World-2DPAGE Repository.

WORLD-2DPAGE List
Index to 2-D PAGE databases and services


This page contains references to known 2-D PAGE database servers, as well as to 2-D PAGE related servers and services. You may also find related information in the Proteomics Links page of the Swiss Proteomics Society.
For a reference to federated 2-D PAGE database, see Appel et Al., Electrophoresis 17, 1996, 540-546, 1996.

[2-DE databases][Services & Software][Journals & Societies][Meetings]



2-DE databases

Multi species
federated World-2DPAGE Portal A dynamic portal to query simultaneously World-Wide gel-based proteomics databases
federated World-2DPAGE Repository A public standards-compliant repository for gel-based proteomics data published in the literature
federated SWISS-2DPAGE SIB Swiss Institute of Bioinformatics Human Liver, Plasma, HepG2, Red blood cells, Lymphoma, HepG2 Secreted Proteins, Cerebrospinal Fluid, Macrophage Like Cell Line (U937), Erythroleukemia Cell, Platelet, Kidney, Promyelocytic Leukemia Cells (HL60), Colorectal epithelia cells, Colorectal adenocarcinoma cell line (DL-1), Soluble nuclear proteins and matrix from liver tissue, Nucleoli from Hela cells (1D and 2D), Lymphocytes
Mus musculus Liver, Gastrocnemius muscle, Pancreatic islet cells, Brown adipose tissue, White adipose tissue, Soluble nuclear proteins and matrix from liver tissue
Arabidopsis thaliana, Dictyostelium discoideum, Escherichia coli (several pI ranges and DIGE 4.5-6.5), Saccharomyces cerevisiae, Staphylococcus aureus (N315)
federated SIENA-2DPAGE Department of Molecular Biology, University of Siena, Italy Human Breast ductal carcinoma and histologically normal tissue, Amniotic fluid
Chlamydia trachomatis, Caenorhabditis elegans
federated UCD 2D-PAGE The UCD Conway Institute Proteome Research Centre (CIPRC), University College Dublin, Ireland Human Brain cortex, Heart ventricle, Endothelial cell, Neutrophil,
Dog Heart ventricle
Rat Heart ventricle
Mouse Spinal cord
Pig
Guinea Pig
Saccharomyces cerevisiae (Baker's yeast)
federated 2-DE database Max Planck Institute for Infection Biology, Berlin, Germany Human Jurkat T-cells, synovial fluid exosomes
Mouse Mammary gland, urea soluble lens proteins
Rat liver and muscle 20S proteasome subtype II & IV
Bacillus amyloliquefaciens, Bacillus anthracis, Bartonella henselae, Borrelia garinii, Chlamydia pneumoniae, Chlamydophila pneumoniae, Francisella tularensis, Helicobacter pylori, Leishmania mexicana, Mycobacterium bovis, Mycobacterium tuberculosis, Mycoplasma pneumoniae, Paracoccus denitrificans, Vibrio cholerae
Mammalia
federated DOSAC-COBS 2D-PAGE University of Palermo, Italy Human various breast cancer samples (cells, serum, etc.), dermal fibroblasts, mammary cells, lymphocytes, U937 and HL60 cell lines
federated RAT HEART-2DPAGE German Heart Institute, Berlin, Germany Rat Heart
federated HEART-2DPAGE German Heart Institute, Berlin, Germany Human Heart (ventricle, atrium)
federated HSC-2DPAGE Heart Science Centre, Harefield Hospital, UK Human Heart (ventricle), endothelial cells
Rat, Dog Heart (ventricle)
federated HP-2DPAGE - Heart 2-DE Database MDC & MPIIB, Berlin, Germany Human Heart (ventricule)
federated USC-OGP 2-DE database University of Santiago de Compostela (USC), ES Human Platelet (various pI ranges), Uveal melanoma
federated REPRODUCTION-2DPAGE Nanjing Medical University, P. R. China Human Ovary, Testis
Mouse Testis
federated Washington University Inner Ear Protein Database Washington University, USA Human Perilymph
Guinea pig Endolymph, organ of Corti, otoconia, tectorial membrane
federated Toothprint - 2-DE gels of dental tissues University of Otago, Dunedin, New Zealand Rat Enamel
federated JPLS Proteomics database Ludwig Institute for Cancer Research, Melbourne, Australia Human Breast carcinoma cell line, Placenta, Colorectal cell line
Mouse colonic crypts
partially 2-DE Map of Cerebrospinal Fluid Proteome Lee Research Group at Cornell University, USA Human Cerebrospinal Fluid
partially 2-DE maps Proteomics and Protein Structure Study Group, at Milano University, Italy Cow Sera (during dioestrus), positive acute-phase reactants detected in serum from a cow with udder edema (inset C)
Rat Serum (control Sprague-Dawley (CD) female and male rats, turpentine-treated rats, diabetic rats, stroke-prone rats), urine (control female and male rats, stroke-prone rats), cerebrospinal fluid (control and stroke-prone rats)
Mouse Serum
partially HUVEC (Proteomics of Human Umbilical Vein Endothelial Cell) Hopital Saint-Antoine, Paris, France Human Umbilical vein endothelial cell
partially Tooth Pulp 2-D Proteomics Core Facility of the Biocenter Oulu, University of Oulu, Finland Human Tooth pulp tissue (healthy and carious)
partially Vascular Cell database Department of Cardiac & Vascular Sciences, University of London, UK Mouse aortic smooth muscle cells, Sca-1+ progenitor cells, Embryonic Stem Cells
other LECB 2D PAGE Gel Image Data Sets CCR Nanobiology Program, USA Human leukemias (AML, ALL, CLL, HCL and other), HL-60 cell line, Molt-4 cell line, serum (Fetal Alchohol Syndrome, Rett Syndrome), Urine (cadmium-exposure, mercury-exposure) - 500 gel images
Plant
federated Proteome database - Tabacco BY-2 cell suspension culture, Musa meristem, Arabidopsis root at University of Antwerp, Belgium
federated Rice Proteome Database at National Institute of Agrobiological Sciences, Japan
partially Arabidopsis 2D gel at Institut des Sciences du Végétal, CNRS - Gif-sur-Yvette, France
partially Arabidopsis Seed Proteome at INRA, Lyon, France
partially GABI primary database - 2-DE database for 8 different Arabidospis thaliana tissues (inflorescence, stem, primary leaf, leaf, seed, seedling, silique, root) of the Genomanalyse im biologischen System Pflanze, Germany
partially NASC Proteomics database for Arabidopsis data at the Nottingham Arabidopsis Stock Centre, University of Nottingham, UK
partially Plant Proteomics database (PROTICdb) at UMR de Genetique Vegetale du Moulon, Gif-sur-Yvette, France
partially 2-D gels for maritime pine at INRA, Bordeaux, France
partially 2-D PAGE of Medicago truncatula and other plants at The Samuel Roberts Noble Foundation, Ardmore, USA
other The GelMap Arabidopsis mitochondrial proteome project at Institute for Plant Genetics, Leibniz Universität Hannover, Germany
other Mt Proteomics - the symbiotic proteomics of Medicago truncatula roots at INRA, Epoisses, France
Yeast
federated COMPLUYEAST-2DPAGE - 2-DE database (Candida albicans, Saccharomyces cerevisiae) at Universidad complutense Madrid, Spain
partially YMP - Yeast Mitochondrial Proteome at Proteomics Core Facility of the Biocenter Oulu, University of Oulu, Finland
partially YPM - Yeast Protein Map at Institut de Biochimie et Génétique Cellulaires, Bordeaux, France
Other Eukaryota
federated KAIKO 2DDB - the Silkworm-2DPAGE (various organs, tissues at various developmental stages) from National Institute of Agrobiological Sciences, Japan
other FishProm - 2DE gels from salmonid fish tissue extracts at University of Aberdeen, UK
Archaea, Bacteria, Viruses and Parasites
federated 2DBase-Ecoli - A 2D-PAGE Database of Escherichia coli (various growing conditions) at University of Bielefeld - Fermentation Engineering Group (AGFT), Germany
federated CGL14067-2DPAGE - A 2D-PAGE Database of Corynebacterium glutamicum ATCC14067 (several pI ranges) at Laboratory of Microbial Physiology, Hokkaido University, Japan
federated NIBR 2D-PAGE - 2D-PAGE Database of Staphylococcus aureus Mu50 (several pI ranges) at Novartis Institutes for BioMedical Research, Basel, Switzerland
federated PHCI-2DPAGE - Parasite host cell interaction 2D-PAGE database, at Department of Medical Microbioloy and Immunology, University of Aarhus, Denmark
federated Plasmo2Dbase - Plasmodium falciparum 2-DE database at Indian Institute of Science, Bangalore, India
partially Helicobacter pylori Proteome 2-D Gel Database, at Kenyon College, Ohio, USA
partially Listeria monocytogenes 2-DE maps, at INRA, Clermont-Ferrand, France
partially Methanococcus jannaschii 2D database,at Argonne protein mapping group server, Chicago, USA
partially Pseudomonas syringae 2DE Maps,from Lee Research Group at Cornell University, USA
partially SWICZ: Swiss-Czech Proteomics Server - developmental 2D-PAGE databases for Caulobacter crescentus, Streptomyces coelicolor, Streptomyces granaticolor, Neisseria meningitidis, at Inst. of Microbiology, Prague, Czech Republic
partially 2-D PAGE Aberdeen (Haemophilus influenzae and Neisseria meningitidis), at Department of Medical Microbiology, University of Aberdeen, Scotland
Cell lines
partially TMIG-2DPAGE - Age-related Proteome Database at Tokyo Metropolitan Institute of Gerontology, Japan


Services

Software
Local services from the Expasy server are marked by local .

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