resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained.
It will be discontinued on 31-May-2024.

Swiss-2DPAGE data (text records and image files) will continue to be available from https://ftp.expasy.org/databases/swiss-2dpage/.

World-2DPAGE Repository no longer accepts submissions.


World-2DPAGE Repository 
Search by  [accession number] 
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] *
[graphical interface]

     Databases

use 'Ctrl' to select several
databases


Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
     

Protein list for World-2DPAGE Repository [0021] RUNX1_DAY7 
Mouse embryonic stem cells overexpressing Runx1, Day 7  {Mus musculus (Mouse)}
tissue: Embryonic stem cell


(map ID: submission_0021:RUNX1_DAY7)
Release: 3 -- 30 November 2011

(local documents: preparation  / informatics )


Protein list for runx1_day7   55 identified spots / 54 protein entries

Gene Name Description Accession n° Spot ID Exp pI Exp Mw Mapping Methods Comment Topics References
Akap8 RecName: Full=A-kinase anchor protein 8; Short=AKAP-8; AltName: Full=A-kinase anchor protein 95 kDa; Short=AKAP 95; Q9DBR0
(AKAP8_MOUSE)
139
5.04
76'200
{MS/MS}
identification,expression
1
Alb RecName: Full=Serum albumin; Flags: Precursor; P07724
(ALBU_MOUSE)
3459
5.75
68'640
{MS/MS}
identification,expression
1
Apoe RecName: Full=Apolipoprotein E; Short=Apo-E; Flags: Precursor; P08226
(APOE_MOUSE)
3078
5.82
33'200
{MS/MS}
identification,expression
1
Ass1 RecName: Full=Argininosuccinate synthase; EC=6.3.4.5; AltName: Full=Citrulline--aspartate ligase; P16460
(ASSY_MOUSE)
2355
8.36
46'550
{MS/MS}
identification,expression
1
Atp5c1 RecName: Full=ATP synthase subunit gamma, mitochondrial; AltName: Full=F-ATPase gamma subunit; Flags: Precursor; Q91VR2
(ATPG_MOUSE)
941
9.06
32'860
{MS/MS}
identification,expression
1
Bckdha RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; EC=1.2.4.4; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDE1A; Short=BCKDH E1-alpha; Flags: Precursor; P50136
(ODBA_MOUSE)
2887
6.27
42'850
{MS/MS}
identification,expression
1
Bdh1 RecName: Full=D-beta-hydroxybutyrate dehydrogenase, mitochondrial; Short=BDH; EC=1.1.1.30; AltName: Full=3-hydroxybutyrate dehydrogenase; Flags: Precursor; Q80XN0
(BDH_MOUSE)
935
9.14
38'260
{MS/MS}
identification,expression
1
Cct5 RecName: Full=T-complex protein 1 subunit epsilon; Short=TCP-1-epsilon; AltName: Full=CCT-epsilon; P80316
(TCPE_MOUSE)
3448
5.72
59'580
{MS/MS}
identification,expression
1
Cotl1 RecName: Full=Coactosin-like protein; Q9CQI6
(COTL1_MOUSE)
3562
5.28
15'900
{MS/MS}
identification,expression
1
Dld RecName: Full=Dihydrolipoyl dehydrogenase, mitochondrial; EC=1.8.1.4; AltName: Full=Dihydrolipoamide dehydrogenase; Flags: Precursor; O08749
(DLDH_MOUSE)
414
7.99
54'230
{MS/MS}
identification,expression
1
Dppa4 RecName: Full=Developmental pluripotency-associated protein 4; Q8CCG4
(DPPA4_MOUSE)
662
8.97
32'670
{MS/MS}
identification,expression
1
Eif1a RecName: Full=Eukaryotic translation initiation factor 1A; Short=eIF-1A; AltName: Full=Eukaryotic translation initiation factor 4C; Short=eIF-4C; Q60872
(IF1A_MOUSE)
3410
9.10
16'450
{MS/MS}
identification,expression
1
Eno1 RecName: Full=Alpha-enolase; EC=4.2.1.11; AltName: Full=2-phospho-D-glycerate hydro-lyase; AltName: Full=Enolase 1; AltName: Full=Non-neural enolase; Short=NNE; P17182
(ENOA_MOUSE)
470
6.37
47'090
{MS/MS}
identification,expression
1
Fabp3 RecName: Full=Fatty acid-binding protein, heart; AltName: Full=Fatty acid-binding protein 3; AltName: Full=Heart-type fatty acid-binding protein; Short=H-FABP; AltName: Full=Mammary-derived growth inhibitor; Short=MDGI; P11404
(FABPH_MOUSE)
3588
6.10
14'800
{MS/MS}
identification,expression
1
Gcat RecName: Full=2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; Short=AKB ligase; EC=2.3.1.29; AltName: Full=Aminoacetone synthase; AltName: Full=Glycine acetyltransferase; Flags: Precursor; O88986
(KBL_MOUSE)
631
6.92
44'900
{MS/MS}
identification,expression
1
Gsto1 RecName: Full=Glutathione S-transferase omega-1; Short=GSTO-1; EC=2.5.1.18; AltName: Full=p28; O09131
(GSTO1_MOUSE)
1134
6.92
27'400
{MS/MS}
identification,expression
1
Gtpbp1 RecName: Full=GTP-binding protein 1; Short=G-protein 1; Short=GP-1; Short=GP1; O08582
(GTPB1_MOUSE)
1255
7.64
73'480
{MS/MS}
identification,expression
1
Hnrnpf RecName: Full=Heterogeneous nuclear ribonucleoprotein F; Short=hnRNP F; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein F, N-terminally processed; Q9Z2X1
(HNRPF_MOUSE)
2612
5.31
45'700
{MS/MS}
identification,expression
1
Hnrnpm RecName: Full=Heterogeneous nuclear ribonucleoprotein M; Short=hnRNP M; Q9D0E1
(HNRPM_MOUSE)
376
8.80
77'590
{MS/MS}
identification,expression
1
Hspa8 RecName: Full=Heat shock cognate 71 kDa protein; AltName: Full=Heat shock 70 kDa protein 8; P63017
(HSP7C_MOUSE)
2861
5.37
70'700
{MS/MS}
identification,expression
1
Hspa9 RecName: Full=Stress-70 protein, mitochondrial; AltName: Full=75 kDa glucose-regulated protein; Short=GRP-75; AltName: Full=Heat shock 70 kDa protein 9; AltName: Full=Mortalin; AltName: Full=Peptide-binding protein 74; Short=PBP74; AltName: Full=p66 MOT; Flags: Precursor; P38647
(GRP75_MOUSE)
2358
2430
5.91
5.91
73'480
73'480
{MS/MS}
{MS/MS}
identification,expression
identification,expression
1
1
Hspd1 RecName: Full=60 kDa heat shock protein, mitochondrial; AltName: Full=60 kDa chaperonin; AltName: Full=Chaperonin 60; Short=CPN60; AltName: Full=HSP-65; AltName: Full=Heat shock protein 60; Short=HSP-60; Short=Hsp60; AltName: Full=Mitochondrial matrix protein P1; Flags: Precursor; P63038
(CH60_MOUSE)
2512
5.91
60'910
{MS/MS}
identification,expression
1
Idh2 RecName: Full=Isocitrate dehydrogenase [NADP], mitochondrial; Short=IDH; EC=1.1.1.42; AltName: Full=ICD-M; AltName: Full=IDP; AltName: Full=NADP(+)-specific ICDH; AltName: Full=Oxalosuccinate decarboxylase; Flags: Precursor; P54071
(IDHP_MOUSE)
644
9.60
0'051
{MS/MS}
identification,expression
1
Igf2bp2 RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2; Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName: Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ family member 2; Q5SF07
(IF2B2_MOUSE)
3549
5.02
65'540
{MS/MS}
identification,expression
1
Lap3 RecName: Full=Cytosol aminopeptidase; EC=3.4.11.1; AltName: Full=Leucine aminopeptidase 3; Short=LAP-3; AltName: Full=Leucyl aminopeptidase; AltName: Full=Proline aminopeptidase; EC=3.4.11.5; AltName: Full=Prolyl aminopeptidase; Q9CPY7
(AMPL_MOUSE)
425
7.62
56'100
{MS/MS}
identification,expression
1
Ldhb RecName: Full=L-lactate dehydrogenase B chain; Short=LDH-B; EC=1.1.1.27; AltName: Full=LDH heart subunit; Short=LDH-H; P16125
(LDHB_MOUSE)
2920
5.70
36'540
{MS/MS}
identification,expression
1
Mdh2 RecName: Full=Malate dehydrogenase, mitochondrial; EC=1.1.1.37; Flags: Precursor; P08249
(MDHM_MOUSE)
841
8.83
35'570
{MS/MS}
identification,expression
1
Mical2 RecName: Full=Protein MICAL-2; Q8BML1
(MICA2_MOUSE)
3267
6.06
110'100
{MS/MS}
identification,expression
1
Mrpl1 RecName: Full=39S ribosomal protein L1, mitochondrial; Short=L1mt; Short=MRP-L1; Flags: Precursor; Q99N96
(RM01_MOUSE)
875
7.70
34'900
{MS/MS}
identification,expression
1
Nme1 RecName: Full=Nucleoside diphosphate kinase A; Short=NDK A; Short=NDP kinase A; EC=2.7.4.6; AltName: Full=Metastasis inhibition factor NM23; AltName: Full=NDPK-A; AltName: Full=Tumor metastatic process-associated protein; AltName: Full=nm23-M1; P15532
(NDKA_MOUSE)
1114
8.44
18'670
{MS/MS}
identification,expression
1
Npm1 RecName: Full=Nucleophosmin; Short=NPM; AltName: Full=Nucleolar phosphoprotein B23; AltName: Full=Nucleolar protein NO38; AltName: Full=Numatrin; Q61937
(NPM_MOUSE)
2923
4.62
32'540
{MS/MS}
identification,expression
1
Otc RecName: Full=Ornithine carbamoyltransferase, mitochondrial; EC=2.1.3.3; AltName: Full=Ornithine transcarbamylase; Short=OTCase; Flags: Precursor; P11725
(OTC_MOUSE)
2314
8.96
39'800
{MS/MS}
identification,expression
1
Pdia6 RecName: Full=Protein disulfide-isomerase A6; EC=5.3.4.1; AltName: Full=Thioredoxin domain-containing protein 7; Flags: Precursor; Q922R8
(PDIA6_MOUSE)
3039
4.90
0'048
{MS/MS}
identification,expression
1
Pebp1 RecName: Full=Phosphatidylethanolamine-binding protein 1; Short=PEBP-1; AltName: Full=HCNPpp; Contains: RecName: Full=Hippocampal cholinergic neurostimulating peptide; Short=HCNP; P70296
(PEBP1_MOUSE)
3288
5.19
20'840
{MS/MS}
identification,expression
1
Pkm2 RecName: Full=Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; AltName: Full=Pyruvate kinase muscle isozyme; P52480
(KPYM_MOUSE)
403
7.18
57'850
{MS/MS}
identification,expression
1
Prx RecName: Full=Periaxin; O55103
(PRAX_MOUSE)
2503
5.20
14'750
{MS/MS}
identification,expression
1
Psme1 RecName: Full=Proteasome activator complex subunit 1; AltName: Full=11S regulator complex subunit alpha; Short=REG-alpha; AltName: Full=Activator of multicatalytic protease subunit 1; AltName: Full=Proteasome activator 28 subunit alpha; Short=PA28a; Short=PA28alpha; P97371
(PSME1_MOUSE)
3146
5.29
28'650
{MS/MS}
identification,expression
1
Rad23b RecName: Full=UV excision repair protein RAD23 homolog B; Short=HR23B; Short=mHR23B; AltName: Full=XP-C repair-complementing complex 58 kDa protein; Short=p58; P54728
(RD23B_MOUSE)
2458
4.77
43'490
{MS/MS}
identification,expression
1
Ranbp1 RecName: Full=Ran-specific GTPase-activating protein; AltName: Full=HpaII tiny fragments locus 9a protein; AltName: Full=Ran-binding protein 1; Short=RANBP1; P34022
(RANG_MOUSE)
3465
5.15
23'560
{MS/MS}
identification,expression
1
Rbm3 RecName: Full=Putative RNA-binding protein 3; AltName: Full=RNA-binding motif protein 3; O89086
(RBM3_MOUSE)
1416
6.84
16'590
{MS/MS}
identification,expression
1
S100a11 RecName: Full=Protein S100-A11; AltName: Full=Calgizzarin; AltName: Full=Endothelial monocyte-activating polypeptide; Short=EMAP; AltName: Full=Protein S100-C; AltName: Full=S100 calcium-binding protein A11; P50543
(S10AB_MOUSE)
3653
5.28
0'011
{MS/MS}
identification,expression
1
Sec22b RecName: Full=Vesicle-trafficking protein SEC22b; AltName: Full=ER-Golgi SNARE of 24 kDa; Short=ERS-24; Short=ERS24; AltName: Full=SEC22 vesicle-trafficking protein homolog B; AltName: Full=SEC22 vesicle-trafficking protein-like 1; Short=mSec22b; O08547
(SC22B_MOUSE)
169
8.67
24'720
{MS/MS}
identification,expression
1
Sept1 RecName: Full=Septin-1; AltName: Full=Differentiation protein 6; Short=Protein Diff6; AltName: Full=Peanut-like protein 3; P42209
(SEPT1_MOUSE)
3144
5.70
41'800
{MS/MS}
identification,expression
1
Serpinh1 RecName: Full=Serpin H1; AltName: Full=47 kDa heat shock protein; AltName: Full=Collagen-binding protein; Short=Colligin; AltName: Full=Serine protease inhibitor J6; Flags: Precursor; P19324
(SERPH_MOUSE)
645
8.90
46'560
{MS/MS}
identification,expression
1
Set RecName: Full=Protein SET; AltName: Full=Phosphatase 2A inhibitor I2PP2A; Short=I-2PP2A; AltName: Full=Template-activating factor I; Short=TAF-I; Q9EQU5
(SET_MOUSE)
1509
4.22
33'300
{MS/MS}
identification,expression
1
Sipa1l1 RecName: Full=Signal-induced proliferation-associated 1-like protein 1; Short=SIPA1-like protein 1; Q8C0T5
(SI1L1_MOUSE)
2836
8.65
19'690
{MS/MS}
Expression
1
Stam RecName: Full=Signal transducing adapter molecule 1; Short=STAM-1; P70297
(STAM1_MOUSE)
3235
4.73
59'730
{MS/MS}
identification,expression
1
Txn RecName: Full=Thioredoxin; Short=Trx; AltName: Full=ATL-derived factor; Short=ADF; P10639
(THIO_MOUSE)
3567
4.80
11'600
{MS/MS}
identification,expression
1
Ubfd1 RecName: Full=Ubiquitin domain-containing protein UBFD1; Q78JW9
(UBFD1_MOUSE)
2813
5.43
33'420
{MS/MS}
identification,expression
1
Ubqln1 RecName: Full=Ubiquilin-1; AltName: Full=Protein linking IAP with cytoskeleton 1; Short=PLIC-1; Q8R317
(UBQL1_MOUSE)
2971
4.86
61'930
{MS/MS}
identification,expression
1
Uchl1 RecName: Full=Ubiquitin carboxyl-terminal hydrolase isozyme L1; Short=UCH-L1; EC=3.4.19.12; EC=6.-.-.-; AltName: Full=Neuron cytoplasmic protein 9.5; AltName: Full=PGP 9.5; Short=PGP9.5; AltName: Full=Ubiquitin thioesterase L1; Q9R0P9
(UCHL1_MOUSE)
3214
5.33
24'820
{MS/MS}
identification,expression
1
Uchl3 RecName: Full=Ubiquitin carboxyl-terminal hydrolase isozyme L3; Short=UCH-L3; EC=3.4.19.12; AltName: Full=Ubiquitin thioesterase L3; Q9JKB1
(UCHL3_MOUSE)
3198
5.08
26'160
{MS/MS}
identification,expression
1
Uchl5 RecName: Full=Ubiquitin carboxyl-terminal hydrolase isozyme L5; Short=UCH-L5; EC=3.4.19.12; AltName: Full=Ubiquitin C-terminal hydrolase UCH37; AltName: Full=Ubiquitin thioesterase L5; Q9WUP7
(UCHL5_MOUSE)
2927
5.24
37'590
{MS/MS}
identification,expression
1
Usp5 RecName: Full=Ubiquitin carboxyl-terminal hydrolase 5; EC=3.4.19.12; AltName: Full=Deubiquitinating enzyme 5; AltName: Full=Isopeptidase T; AltName: Full=Ubiquitin thiolesterase 5; AltName: Full=Ubiquitin-specific-processing protease 5; P56399
(UBP5_MOUSE)
2303
4.89
95'700
{MS/MS}
identification,expression
1
Mapping legends: { MS/MS } => 'Tandem mass spectrometry'



Cited references

# PubMed/Medline Authors Location
[1] - De Cegli R., Romito A., Iacobacci S., Mao L., Lauria M., Fedele A.O., Klose J., Borel C., Descombes P., Antonarakis S.E., Di Bernardo D., Banfi S., Ballabio A., Cobellis G.; Genome Biol 11(6):R64 (2010).
''A mouse Embryonic Stem Cell Bank for inducible overexpression of human Chromosome 21 genes'';


Gel experimental information

Information Type Data
Map name RUNX1_DAY7 {Mouse embryonic stem cells overexpressing Runx1, Day 7}
Dimension 2-D
Related documents (local documents: preparation  / informatics )
Strain Comment [species] 129 [Mus musculus (Mouse) / TaxID:10090]
Tissue (Swiss-Prot definition) Embryonic stem cell
pI start: 3.00 - end: 10.00
Mw start: 10000 - end: 200000
Informatics Software Delta2D (Decodon)
Number of identified spots 55
Number of identified proteins 54
Graphical interface
[Click for graphical interface]


World-2DPAGE Repository image

World-2DPAGE Repository (search Map)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server