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Searching in 'World-2DPAGE Repository [0014]' for entry matching: AMPB_RAT

World-2DPAGE Repository (0014):  AMPB_RAT


General information about the entry
View entry in simple text format
Entry nameAMPB_RAT
Primary accession numberO09175
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Aminopeptidase B; Short=AP-B; EC=; AltName: Full=Arginine aminopeptidase; AltName: Full=Arginyl aminopeptidase; AltName: Full=Cytosol aminopeptidase IV;.
Gene nameName=Rnpep
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
  map experimental info

pI=5.64; Mw=72000  [identification data]

IDENTIFICATION: SPOT 2791: SeqCov=22%. MascotPMF=101 [1].
MAPPING (identification):
SPOT 2791: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtO09175; AMPB_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameAMPB_RAT
Primary accession numberO09175
Secondary accession number(s) P97530
Sequence was last modified on July 11, 2002 (version 2)
Annotations were last modified on November 16, 2011 (version 93)
Name and origin of the protein
DescriptionRecName: Full=Aminopeptidase B; Short=AP-B; EC=; AltName: Full=Arginine aminopeptidase; AltName: Full=Arginyl aminopeptidase; AltName: Full=Cytosol aminopeptidase IV;
Gene nameName=Rnpep
Encoded onName=Rnpep
KeywordsAcetylation; Aminopeptidase; Complete proteome; Direct protein sequencing; Hydrolase; Metal-binding; Metalloprotease; Phosphoprotein; Protease; Reference proteome; Secreted; Zinc.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLU61696; AAB52971.1; -; mRNA
EMBLD87515; BAA13413.1; -; mRNA
IPIIPI00193584; -; .
RefSeqNP_112359.1; NM_031097.1; .
UniGeneRn.10979; -; .
ProteinModelPortalO09175; -; .
STRINGO09175; -; .
MEROPSM01.014; -; .
PhosphoSiteO09175; -; .
World-2DPAGE0004:O09175; -; .
PRIDEO09175; -; .
GeneID81761; -; .
KEGGrno:81761; -; .
UCSCBC061718; rat; .
CTD6051; -; .
RGD621137; Rnpep; .
eggNOGroNOG12454; -; .
HOVERGENHBG001274; -; .
InParanoidO09175; -; .
OrthoDBEOG4X6C7T; -; .
PhylomeDBO09175; -; .
NextBio615546; -; .
GenevestigatorO09175; -; .
GermOnlineENSRNOG00000006720; Rattus norvegicus; .
GOGO:0009897; C:external side of plasma membrane; IDA:RGD; .
GOGO:0005615; C:extracellular space; IDA:RGD; .
GOGO:0005794; C:Golgi apparatus; NAS:UniProtKB; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0030141; C:stored secretory granule; IDA:RGD; .
GOGO:0019717; C:synaptosome; IDA:RGD; .
GOGO:0050897; F:cobalt ion binding; IDA:RGD; .
GOGO:0005507; F:copper ion binding; IDA:RGD; .
GOGO:0070006; F:metalloaminopeptidase activity; IDA:RGD; .
GOGO:0042277; F:peptide binding; IDA:RGD; .
GOGO:0008270; F:zinc ion binding; NAS:UniProtKB; .
GOGO:0007568; P:aging; IEP:RGD; .
GOGO:0019370; P:leukotriene biosynthetic process; IEA:InterPro; .
GOGO:0045776; P:negative regulation of blood pressure; IMP:RGD; .
GOGO:0016485; P:protein processing; NAS:UniProtKB; .
GOGO:0006508; P:proteolysis; IC:UniProtKB; .
GOGO:0060041; P:retina development in camera-type eye; IEP:RGD; .
InterProIPR016024; ARM-type_fold; .
InterProIPR015571; Pept_M1_aminopeptidase-B; .
InterProIPR001930; Peptidase_M1; .
InterProIPR015211; Peptidase_M1_C; .
InterProIPR014782; Peptidase_M1_N; .
KOK01260; -; .
PANTHERPTHR11533:SF5; Pept_M1_aminopeptidase-B; 1; .
PANTHERPTHR11533; Peptidase_M1; 1; .
PfamPF09127; Leuk-A4-hydro_C; 1; .
PfamPF01433; Peptidase_M1; 1; .
SUPFAMSSF48371; ARM-type_fold; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server