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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0030]' for entry matching: CCS_RAT World-2DPAGE Repository (0030):  CCS_RAT CCS_RAT General information about the entry View entry in simple text format Entry name CCS_RAT Primary accession number Q9JK72 integrated into World-2DPAGE Repository (0030) on  November 9, 2010 (release 1) 2D Annotations were last modified on June 21, 2011 (version 2) General Annotations were last modified on  November 23, 2011 (version 2) Name and origin of the protein Description RecName: Full=Copper chaperone for superoxide dismutase; AltName: Full=Superoxide dismutase copper chaperone;. Gene name Name=Ccs Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000006; D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C. ''Two-dimensional gel proteome reference map of INS-1E cells'' Proteomics 11(7):1365-1369 (2011) 2D PAGE maps for identified proteins How to interpret a protein RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7} Rattus norvegicus (Rat)   map experimental info   RAT_INS1E_4-7 MAP LOCATIONS: SPOT 1847: pI=6.04; Mw=35504   [identification data] IDENTIFICATION: SPOT 1847: Mascot protein score=139. Number of peptides=3 [1]. MAPPING (identification): SPOT 1847: Tandem mass spectrometry [1]. Copyright Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium Cross-references UniProtKB/Swiss-Prot Q9JK72; CCS_RAT. World-2DPAGE Repository Q9JK72; CCS_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name CCS_RAT Primary accession number Q9JK72 Secondary accession number(s) B0BMW1 Sequence was last modified on  October 1, 2000 (version 1) Annotations were last modified on  November 16, 2011 (version 80) Name and origin of the protein Description RecName: Full=Copper chaperone for superoxide dismutase; AltName: Full=Superoxide dismutase copper chaperone; Gene name Name=Ccs Encoded on Name=Ccs Keywords Chaperone; Complete proteome; Copper; Cytoplasm; Disulfide bond; Metal-binding; Phosphoprotein; Reference proteome; Zinc. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF255305; AAF65572.1; -; mRNA EMBL BC158586; AAI58587.1; -; mRNA IPI IPI00202139; -; . RefSeq NP_445877.1; NM_053425.1; . UniGene Rn.12311; -; . ProteinModelPortal Q9JK72; -; . SMR Q9JK72; 9-237; . IntAct Q9JK72; 1; . STRING Q9JK72; -; . PhosphoSite Q9JK72; -; . PRIDE Q9JK72; -; . Ensembl ENSRNOT00000026670; ENSRNOP00000026670; ENSRNOG00000019691; . GeneID 84485; -; . KEGG rno:84485; -; . UCSC NM_053425; rat; . CTD 9973; -; . RGD 620403; Ccs; . eggNOG roNOG08275; -; . GeneTree ENSGT00530000063226; -; . HOVERGEN HBG018933; -; . InParanoid Q9JK72; -; . OrthoDB EOG45TCNZ; -; . PhylomeDB Q9JK72; -; . NextBio 617016; -; . ArrayExpress Q9JK72; -; . Genevestigator Q9JK72; -; . GermOnline ENSRNOG00000019691; Rattus norvegicus; . GO GO:0005829; C:cytosol; IBA:RefGenome; . GO GO:0005743; C:mitochondrial inner membrane; IBA:RefGenome; . GO GO:0005634; C:nucleus; IBA:RefGenome; . GO GO:0019899; F:enzyme binding; IDA:RGD; . GO GO:0004784; F:superoxide dismutase activity; IEA:InterPro; . GO GO:0016532; F:superoxide dismutase copper chaperone activity; IBA:RefGenome; . GO GO:0008270; F:zinc ion binding; IBA:RefGenome; . GO GO:0015680; P:intracellular copper ion transport; IBA:RefGenome; . GO GO:0019430; P:removal of superoxide radicals; IBA:RefGenome; . InterPro IPR006121; HeavyMe-assoc_HMA; . InterPro IPR024134; SOD_Cu/Zn_/chaperones; . InterPro IPR018152; SOD_Cu/Zn_BS; . InterPro IPR024142; SOD_Cu_chaperone; . InterPro IPR001424; SOD_Cu_Zn_dom; . Gene3D G3DSA:2.60.40.200; SOD_Cu_Zn; 1; . KO K04569; -; . PANTHER PTHR10003:SF27; PTHR10003:SF27; 1; . PANTHER PTHR10003; SOD_Cu_Zn; 1; . Pfam PF00403; HMA; 1; . Pfam PF00080; Sod_Cu; 1; . PRINTS PR00068; CUZNDISMTASE; . SUPFAM SSF55008; HeavyMe_transpt; 1; . SUPFAM SSF49329; SOD_Cu_Zn; 1; . PROSITE PS01047; HMA_1; FALSE_NEG; . PROSITE PS50846; HMA_2; 1; . PROSITE PS00087; SOD_CU_ZN_1; FALSE_NEG; . PROSITE PS00332; SOD_CU_ZN_2; 1; . World-2DPAGE Repository (search AC)