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Searching in 'World-2DPAGE Repository [0030]' for entry matching: DCUP_RAT




World-2DPAGE Repository (0030):  DCUP_RAT


DCUP_RAT


General information about the entry
View entry in simple text format
Entry nameDCUP_RAT
Primary accession numberP32362
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Uroporphyrinogen decarboxylase; Short=UPD; Short=URO-D; EC=4.1.1.37; Flags: Fragment;.
Gene nameName=Urod
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info
 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=6.28; Mw=45605  [identification data]

IDENTIFICATION: SPOT 3031: Mascot protein score=168. Number of peptides=6 [1].
MAPPING (identification):
SPOT 3031: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-ProtP32362; DCUP_RAT.
World-2DPAGE RepositoryP32362; DCUP_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameDCUP_RAT
Primary accession numberP32362
Sequence was last modified on October 1, 1993 (version 1)
Annotations were last modified on September 21, 2011 (version 85)
Name and origin of the protein
DescriptionRecName: Full=Uroporphyrinogen decarboxylase; Short=UPD; Short=URO-D; EC=4.1.1.37; Flags: Fragment;
Gene nameName=Urod
Encoded onName=Urod
KeywordsComplete proteome; Cytoplasm; Decarboxylase; Direct protein sequencing; Heme biosynthesis; Lyase; Phosphoprotein; Porphyrin biosynthesis; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLY00350; CAB50784.1; -; mRNA
IPIIPI00886445; -; .
UniGeneRn.4214; -; .
ProteinModelPortalP32362; -; .
SMRP32362; 8-363; .
STRINGP32362; -; .
PRIDEP32362; -; .
RGD3946; Urod; .
eggNOGroNOG12493; -; .
GeneTreeENSGT00390000018302; -; .
HOVERGENHBG000229; -; .
InParanoidP32362; -; .
OrthoDBEOG46DM33; -; .
PhylomeDBP32362; -; .
ArrayExpressP32362; -; .
GenevestigatorP32362; -; .
GermOnlineENSRNOG00000018211; Rattus norvegicus; .
GOGO:0005829; C:cytosol; IDA:RGD; .
GOGO:0008198; F:ferrous iron binding; IDA:RGD; .
GOGO:0004853; F:uroporphyrinogen decarboxylase activity; IDA:RGD; .
GOGO:0071243; P:cellular response to arsenic-containing substance; IEP:RGD; .
GOGO:0006783; P:heme biosynthetic process; NAS:RGD; .
GOGO:0001889; P:liver development; IEP:RGD; .
GOGO:0014075; P:response to amine stimulus; IEP:RGD; .
GOGO:0032355; P:response to estradiol stimulus; IEP:RGD; .
GOGO:0045471; P:response to ethanol; IEP:RGD; .
GOGO:0060992; P:response to fungicide; IEP:RGD; .
GOGO:0010039; P:response to iron ion; IEP:RGD; .
GOGO:0046689; P:response to mercury ion; IEP:RGD; .
GOGO:0051597; P:response to methylmercury; IEP:RGD; .
GOGO:0014070; P:response to organic cyclic compound; IEP:RGD; .
GOGO:0046502; P:uroporphyrinogen III metabolic process; IDA:RGD; .
InterProIPR006361; Uroporphyrinogen_deCO2ase_HemE; .
InterProIPR000257; Uroporphyrinogen_deCOase; .
PANTHERPTHR21091:SF2; HemE; 1; .
PfamPF01208; URO-D; 1; .
TIGRFAMsTIGR01464; HemE; 1; .
PROSITEPS00906; UROD_1; 1; .
PROSITEPS00907; UROD_2; 1; .



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