resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained.

World-2DPAGE Repository no longer accepts submissions.


World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Databases

use 'Ctrl' to select several
databases


Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
     
Searching in 'World-2DPAGE Repository [0054]' for entry matching: HNRPC_HUMAN




World-2DPAGE Repository (0054):  HNRPC_HUMAN


HNRPC_HUMAN


General information about the entry
View entry in simple text format
Entry nameHNRPC_HUMAN
Primary accession numberP07910
integrated into World-2DPAGE Repository (0054) on November 28, 2012 (release 1)
2D Annotations were last modified onNovember 28, 2012 (version 1)
General Annotations were last modified on October 23, 2014 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoproteins C1/C2; Short=hnRNP C1/C2;.
Gene nameName=HNRNPC
Synonyms=HNRPC
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
DOI=10.1074/mcp.M112.022947;
Vernocchi S., Battello N., Schmitz S., Revets D., Billing A.M., Turner J.D., Muller C.P.
''Membrane glucocorticoid receptor activation induces proteomic changes aligning with classical glucocorticoid-effects''
Molecular & Cellular Proteomics 12(7):1764-1779 (2013)
2D PAGE maps for identified proteins
How to interpret a protein

HSAPIENS_CCRF-CEM_3-10 {CCRF-CEM cells stimulated with Cort-BSA (internal standard)}
Homo sapiens (Human)
HSAPIENS_CCRF-CEM_3-10
  map experimental info
 
HSAPIENS_CCRF-CEM_3-10

MAP LOCATIONS:
pI=4.95; Mw=33539  [identification data]

%COV: SPOT 835: 49 [1].
SCORE: SPOT 835: 335 [1].
SEARCH ENGINE: SPOT 835: Mascot [1].
MAPPING (identification):
SPOT 835: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Claude P. Muller, Centre de Recherche Public de la Sante / National Public Health Laboratory, Luxembourg
Cross-references
UniProtKB/Swiss-ProtP07910; HNRPC_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameHNRPC_HUMAN
Primary accession numberP07910
Secondary accession number(s) D3DS19 D3DS22 P22628 Q53EX2 Q59FD3 Q5FWE8 Q86SF8 Q86U45 Q96HK7 Q96HM4 Q96IY5 Q9BTS3
Sequence was last modified on June 13, 2006 (version 4)
Annotations were last modified on October 1, 2014 (version 186)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoproteins C1/C2; Short=hnRNP C1/C2;
Gene nameName=HNRNPC
Synonyms=HNRPC
Encoded onName=HNRNPC; Synonyms=HNRPC
Keywords3D-structure; Acetylation; Alternative splicing; Coiled coil; Complete proteome; Direct protein sequencing; Isopeptide bond; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Ribonucleoprotein; RNA-binding; Spliceosome; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM29063; AAA36576.1; -; mRNA
EMBLM16342; AAA52680.1; -; mRNA
EMBLBX161480; CAD61934.1; -; mRNA
EMBLBX247961; CAD62300.1; -; mRNA
EMBLBX247992; CAD62326.1; -; mRNA
EMBLAB209527; BAD92764.1; ALT_INIT; mRNA
EMBLAK223517; BAD97237.1; -; mRNA
EMBLCH471078; EAW66392.1; -; Genomic_DNA
EMBLCH471078; EAW66393.1; -; Genomic_DNA
EMBLCH471078; EAW66394.1; -; Genomic_DNA
EMBLCH471078; EAW66395.1; -; Genomic_DNA
EMBLCH471078; EAW66396.1; -; Genomic_DNA
EMBLCH471078; EAW66399.1; -; Genomic_DNA
EMBLCH471078; EAW66400.1; -; Genomic_DNA
EMBLBC003394; AAH03394.1; -; mRNA
EMBLBC007052; AAH07052.1; -; mRNA
EMBLBC008364; AAH08364.1; -; mRNA
EMBLBC008423; AAH08423.1; -; mRNA
EMBLBC066932; AAH66932.1; -; mRNA
EMBLBC089438; AAH89438.1; -; mRNA
EMBLBC108658; AAI08659.1; -; mRNA
EMBLBC103758; AAI03759.1; -; mRNA
CCDSCCDS41915.1; -. [P07910-1]; .
CCDSCCDS45079.1; -. [P07910-2]; .
PIRA26885; A26885; .
PIRC34504; C34504; .
RefSeqNP_001070910.1; NM_001077442.1. [P07910-1]; .
RefSeqNP_001070911.1; NM_001077443.1. [P07910-2]; .
RefSeqNP_004491.2; NM_004500.3. [P07910-2]; .
RefSeqNP_112604.2; NM_031314.2. [P07910-1]; .
RefSeqXP_006720188.1; XM_006720125.1. [P07910-2]; .
RefSeqXP_006720189.1; XM_006720126.1. [P07910-2]; .
UniGeneHs.508848; -; .
UniGeneHs.675546; -; .
PDB1TXP; NMR; -; A/B/C/D=194-220
PDB1WF2; NMR; -; A=8-92
PDB3LN4; X-ray; 1.30 A; C=102-117
PDBsum1TXP; -; .
PDBsum1WF2; -; .
PDBsum3LN4; -; .
ProteinModelPortalP07910; -; .
SMRP07910; 2-92; .
BioGrid109424; 134; .
DIPDIP-29854N; -; .
IntActP07910; 71; .
MINTMINT-4999718; -; .
ChEMBLCHEMBL2216742; -; .
PhosphoSiteP07910; -; .
DMDM108935845; -; .
SWISS-2DPAGEP07910; -; .
MaxQBP07910; -; .
PaxDbP07910; -; .
PRIDEP07910; -; .
DNASU3183; -; .
EnsemblENST00000420743; ENSP00000404848; ENSG00000092199. [P07910-1]; .
EnsemblENST00000430246; ENSP00000442816; ENSG00000092199. [P07910-2]; .
EnsemblENST00000449098; ENSP00000404559; ENSG00000092199. [P07910-2]; .
EnsemblENST00000553300; ENSP00000450544; ENSG00000092199. [P07910-2]; .
EnsemblENST00000554455; ENSP00000451291; ENSG00000092199. [P07910-1]; .
EnsemblENST00000554969; ENSP00000450725; ENSG00000092199. [P07910-2]; .
EnsemblENST00000555883; ENSP00000450629; ENSG00000092199. [P07910-4]; .
EnsemblENST00000556628; ENSP00000451652; ENSG00000092199. [P07910-3]; .
EnsemblENST00000556897; ENSP00000451176; ENSG00000092199. [P07910-2]; .
EnsemblENST00000557201; ENSP00000452276; ENSG00000092199. [P07910-1]; .
GeneID3183; -; .
KEGGhsa:3183; -; .
UCSCuc001vzw.3; human. [P07910-2]; .
UCSCuc001vzy.3; human. [P07910-1]; .
UCSCuc001wac.3; human. [P07910-4]; .
UCSCuc001wad.3; human. [P07910-3]; .
CTD3183; -; .
GeneCardsGC14M021677; -; .
HGNCHGNC:5035; HNRNPC; .
HPACAB005223; -; .
HPAHPA051075; -; .
MIM164020; gene; .
neXtProtNX_P07910; -; .
PharmGKBPA162391217; -; .
eggNOGNOG311712; -; .
HOVERGENHBG002302; -; .
InParanoidP07910; -; .
KOK12884; -; .
OMAFSSPVEM; -; .
OrthoDBEOG7KWSK9; -; .
PhylomeDBP07910; -; .
TreeFamTF330974; -; .
ReactomeREACT_125; Processing of Capped Intron-Containing Pre-mRNA; .
ReactomeREACT_467; mRNA Splicing - Major Pathway; .
ChiTaRSHNRNPC; human; .
EvolutionaryTraceP07910; -; .
GeneWikiHNRNPC; -; .
GenomeRNAi3183; -; .
NextBio12634; -; .
PROPR:P07910; -; .
ArrayExpressP07910; -; .
BgeeP07910; -; .
GenevestigatorP07910; -; .
GOGO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB; .
GOGO:0005829; C:cytosol; IDA:UniProt; .
GOGO:0070062; C:extracellular vesicular exosome; IDA:UniProt; .
GOGO:0016020; C:membrane; IDA:UniProt; .
GOGO:0000790; C:nuclear chromatin; IDA:UniProt; .
GOGO:0005654; C:nucleoplasm; TAS:Reactome; .
GOGO:0005634; C:nucleus; IDA:UniProt; .
GOGO:0043234; C:protein complex; IDA:UniProt; .
GOGO:0005681; C:spliceosomal complex; IDA:HGNC; .
GOGO:0042802; F:identical protein binding; IPI:IntAct; .
GOGO:0003730; F:mRNA 3'-UTR binding; IDA:UniProt; .
GOGO:0031492; F:nucleosomal DNA binding; IDA:UniProt; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0044822; F:poly(A) RNA binding; IDA:UniProtKB; .
GOGO:0008266; F:poly(U) RNA binding; IDA:UniProt; .
GOGO:0005515; F:protein binding; IPI:UniProtKB; .
GOGO:0003723; F:RNA binding; NAS:HGNC; .
GOGO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:UniProt; .
GOGO:0000980; F:RNA polymerase II distal enhancer sequence-specific DNA binding; IDA:UniProt; .
GOGO:0070935; P:3'-UTR-mediated mRNA stabilization; IMP:UniProt; .
GOGO:0043044; P:ATP-dependent chromatin remodeling; IDA:UniProt; .
GOGO:0010467; P:gene expression; TAS:Reactome; .
GOGO:0000398; P:mRNA splicing; via spliceosome; IC:UniProtKB
GOGO:0001649; P:osteoblast differentiation; IDA:UniProt; .
GOGO:0008380; P:RNA splicing; TAS:Reactome; .
Gene3D3.30.70.330; -; 1; .
InterProIPR017347; hnRNP_C_Raly; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
PfamPF00076; RRM_1; 1; .
PIRSFPIRSF037992; hnRNP-C_Raly; 1; .
SMARTSM00360; RRM; 1; .
PROSITEPS50102; RRM; 1; .



World-2DPAGE Repository image

World-2DPAGE Repository (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server