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Searching in 'World-2DPAGE Repository [0022]' for entry matching: HS90B_RAT




World-2DPAGE Repository (0022):  HS90B_RAT

HS90B_RAT


General information about the entry
View entry in simple text format
Entry nameHS90B_RAT
Primary accession numberP34058
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Heat shock protein HSP 90-beta; AltName: Full=Heat shock 84 kDa; Short=HSP 84; Short=HSP84;.
Gene nameName=Hsp90ab1
Synonyms=Hsp84, Hspcb
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart
HCR_LCR_HEART
  map experimental info 		 
HCR_LCR_HEART

MAP LOCATIONS:
pI=4.97; Mw=83571  [identification data]
pI=4.97; Mw=83571  [identification data]
pI=4.97; Mw=83571  [identification data]

IDENTIFICATION: SPOT 600: SeqCov=19.5%. Peptides MS=14/20. Mascot PMF Score=81 [1]
SPOT 765: SeqCov=23.8%. Peptides MS=18/20. Mascot PMF Score=148 [1]; SPOT 826: SeqCov=17.4%. Peptides MS=5/20. Mascot PMF Score=64 [1].
PEPTIDE EVIDENCE: SPOT 600: 320-HFSVEGQLEFR-330 (74) / 149-HNDDEQYAWESSAGGSFTVR-168 (59) [1]
SPOT 826: 320-HFSVEGQLEFR-330 (74) / 149-HNDDEQYAWESSAGGSFTVR-168 (121) [1].
MAPPING (identification):
SPOT 600: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 765: Peptide mass fingerprinting [1];
SPOT 826: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-ProtP34058; HS90B_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameHS90B_RAT
Primary accession numberP34058
Secondary accession number(s) Q1PSW2 Q66H55 Q68GV5 Q9QWC6
Sequence was last modified on January 23, 2007 (version 4)
Annotations were last modified on November 16, 2011 (version 115)
Name and origin of the protein
DescriptionRecName: Full=Heat shock protein HSP 90-beta; AltName: Full=Heat shock 84 kDa; Short=HSP 84; Short=HSP84;
Gene nameName=Hsp90ab1
Synonyms=Hsp84, Hspcb
Encoded onName=Hsp90ab1; Synonyms=Hsp84, Hspcb
KeywordsAcetylation; ATP-binding; Chaperone; Complete proteome; Cytoplasm; Direct protein sequencing; Nucleotide-binding; Phosphoprotein; Reference proteome; S-nitrosylation; Stress response; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLS45392; AAB23369.1; -; mRNA
EMBLAY695392; AAT99568.1; -; mRNA
EMBLAY695393; AAT99569.1; -; mRNA
EMBLDQ022068; ABE27999.1; -; Genomic_DNA
EMBLBC082009; AAH82009.1; -; mRNA
IPIIPI00471584; -; .
PIRS71306; S71306; .
RefSeqNP_001004082.3; NM_001004082.3; .
UniGeneRn.98667; -; .
ProteinModelPortalP34058; -; .
SMRP34058; 8-691; .
IntActP34058; 4; .
MINTMINT-4576429; -; .
STRINGP34058; -; .
PhosphoSiteP34058; -; .
World-2DPAGE0004:P34058; -; .
PRIDEP34058; -; .
EnsemblENSRNOT00000026920; ENSRNOP00000026920; ENSRNOG00000019834; .
GeneID301252; -; .
KEGGrno:301252; -; .
UCSCNM_001004082; rat; .
CTD3326; -; .
RGD1303075; Hsp90ab1; .
eggNOGroNOG11308; -; .
GeneTreeENSGT00550000074382; -; .
HOVERGENHBG007374; -; .
InParanoidP34058; -; .
OMAGFSKNIK; -; .
OrthoDBEOG42V8FM; -; .
PhylomeDBP34058; -; .
NextBio648395; -; .
ArrayExpressP34058; -; .
GenevestigatorP34058; -; .
GermOnlineENSRNOG00000019834; Rattus norvegicus; .
GOGO:0016324; C:apical plasma membrane; IDA:RGD; .
GOGO:0016323; C:basolateral plasma membrane; IDA:RGD; .
GOGO:0031526; C:brush border membrane; IDA:RGD; .
GOGO:0005829; C:cytosol; IDA:RGD; .
GOGO:0042470; C:melanosome; IEA:UniProtKB-SubCell; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0005524; F:ATP binding; IDA:RGD; .
GOGO:0002135; F:CTP binding; IDA:RGD; .
GOGO:0032564; F:dATP binding; IDA:RGD; .
GOGO:0005525; F:GTP binding; IDA:RGD; .
GOGO:0051082; F:unfolded protein binding; IEA:InterPro; .
GOGO:0002134; F:UTP binding; IDA:RGD; .
GOGO:0071407; P:cellular response to organic cyclic compound; IEP:RGD; .
GOGO:0006457; P:protein folding; TAS:RGD; .
GOGO:0009651; P:response to salt stress; IEP:RGD; .
GOGO:0006986; P:response to unfolded protein; TAS:RGD; .
InterProIPR003594; ATPase-like_ATP-bd; .
InterProIPR019805; Heat_shock_protein_90_CS; .
InterProIPR001404; Hsp90; .
InterProIPR020575; Hsp90_N; .
InterProIPR020568; Ribosomal_S5_D2-typ_fold; .
Gene3DG3DSA:3.30.565.10; ATP_bd_ATPase; 2; .
KOK04079; -; .
PANTHERPTHR11528; Hsp90; 1; .
PfamPF02518; HATPase_c; 1; .
PfamPF00183; HSP90; 1; .
PIRSFPIRSF002583; Hsp90; 1; .
PRINTSPR00775; HEATSHOCK90; .
SMARTSM00387; HATPase_c; 1; .
SUPFAMSSF55874; ATP_bd_ATPase; 1; .
SUPFAMSSF54211; Ribosomal_S5_D2-typ_fold; 1; .
PROSITEPS00298; HSP90; 1; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server