World-2DPAGE Repository

RecName: Full=Eukaryotic initiation factor 4A-II; Short=eIF-4A-II; Short=eIF4A-II; EC=3.6.4.13; AltName: Full=ATP-dependent RNA helicase eIF4A-2;.

Gene name

Name=Eif4a2

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009)

2D PAGE maps for identified proteins

How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb

map experimental info

OB21DSUB

MAP LOCATIONS:

SPOT 397:

pI=5.39; Mw=47000

[identification data]

MAPPING (identification):

SPOT 397: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

NCBI_Protein

56605748.

UniProtKB/Swiss-Prot

Q5RKI1; IF4A2_RAT.

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	IF4A2_RAT
Primary accession number	Q5RKI1
Sequence was last modified on	December 21, 2004 (version 1)
Annotations were last modified on	November 16, 2011 (version 59)
Name and origin of the protein
Description	RecName: Full=Eukaryotic initiation factor 4A-II; Short=eIF-4A-II; Short=eIF4A-II; EC=3.6.4.13; AltName: Full=ATP-dependent RNA helicase eIF4A-2;
Gene name	Name=Eif4a2
Encoded on	Name=Eif4a2
Keywords	Acetylation; ATP-binding; Complete proteome; Direct protein sequencing; Helicase; Hydrolase; Initiation factor; Nucleotide-binding; Protein biosynthesis; Reference proteome; RNA-binding.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	BC085859; AAH85859.1; -; mRNA
IPI	IPI00193595; -; .
RefSeq	NP_001008336.1; NM_001008335.1; .
UniGene	Rn.143972; -; .
HSSP	P60842; 2G9N; .
ProteinModelPortal	Q5RKI1; -; .
SMR	Q5RKI1; 23-401; .
STRING	Q5RKI1; -; .
PhosphoSite	Q5RKI1; -; .
World-2DPAGE	0004:Q5RKI1; -; .
PRIDE	Q5RKI1; -; .
GeneID	303831; -; .
KEGG	rno:303831; -; .
CTD	1974; -; .
RGD	1309225; Eif4a2; .
GeneTree	ENSGT00530000062880; -; .
HOVERGEN	HBG107989; -; .
InParanoid	Q5RKI1; -; .
OrthoDB	EOG4640C1; -; .
PhylomeDB	Q5RKI1; -; .
NextBio	652169; -; .
ArrayExpress	Q5RKI1; -; .
Genevestigator	Q5RKI1; -; .
GermOnline	ENSRNOG00000001815; Rattus norvegicus; .
GO	GO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GO	GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro; .
GO	GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW; .
InterPro	IPR014001; DEAD-like_helicase; .
InterPro	IPR011545; DNA/RNA_helicase_DEAD/DEAH_N; .
InterPro	IPR001650; Helicase_C; .
InterPro	IPR000629; RNA-helicase_DEAD-box_CS; .
InterPro	IPR014014; RNA_helicase_DEAD_Q_motif; .
KO	K03257; -; .
Pfam	PF00270; DEAD; 1; .
Pfam	PF00271; Helicase_C; 1; .
SMART	SM00487; DEXDc; 1; .
SMART	SM00490; HELICc; 1; .
PROSITE	PS00039; DEAD_ATP_HELICASE; 1; .
PROSITE	PS51192; HELICASE_ATP_BIND_1; 1; .
PROSITE	PS51194; HELICASE_CTER; 1; .
PROSITE	PS51195; Q_MOTIF; 1; .

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server

0001
0002
0003
0004
0005
0006
0007
0008
0009
0010
0011
0012
0014
0017
0018
0019
0020
0021
0022
0023
0024
0026
0027
0029
0030
0031
0032
0034
0035
0036
0037
0038
0039
0040
0042
0043
0044
0046
0047
0050
0051
0053
0054
0056
0059
0061
0062
0063
0066
0068
0069
0076
0077
0080
0084
0085
0088