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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0022]' for entry matching: IF5A1_RAT World-2DPAGE Repository (0022):  IF5A1_RAT IF5A1_RAT General information about the entry View entry in simple text format Entry name IF5A1_RAT Primary accession number Q3T1J1 integrated into World-2DPAGE Repository (0022) on  May 7, 2010 (release 1) 2D Annotations were last modified on June 22, 2011 (version 2) General Annotations were last modified on  November 24, 2011 (version 2) Name and origin of the protein Description RecName: Full=Eukaryotic translation initiation factor 5A-1; Short=eIF-5A-1; Short=eIF-5A1; AltName: Full=Eukaryotic initiation factor 5A isoform 1; Short=eIF-5A; AltName: Full=eIF-4D;. Gene name Name=Eif5a Annotated species Rattus [TaxID: 10114] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000593; Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L. ''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity'' Proteomics 11(16):3369-3379 (2011) 2D PAGE maps for identified proteins How to interpret a protein HCR_LCR_HEART {HCR LCR Cardiac Map} Rattus Tissue: Heart   map experimental info   HCR_LCR_HEART MAP LOCATIONS: SPOT 892: pI=5.08; Mw=17049   [identification data] IDENTIFICATION: SPOT 892: SeqCov=27.3%. Peptides MS=3/20. Mascot PMF Score=24 [1]. PEPTIDE EVIDENCE: SPOT 892: 56-VHLVGIDIFTGK-67 (87) [1]. MAPPING (identification): SPOT 892: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Jatin Burniston, Liverpool John Moores University, UK Cross-references UniProtKB/Swiss-Prot Q3T1J1; IF5A1_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name IF5A1_RAT Primary accession number Q3T1J1 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  November 16, 2011 (version 61) Name and origin of the protein Description RecName: Full=Eukaryotic translation initiation factor 5A-1; Short=eIF-5A-1; Short=eIF-5A1; AltName: Full=Eukaryotic initiation factor 5A isoform 1; Short=eIF-5A; AltName: Full=eIF-4D; Gene name Name=Eif5a Encoded on Name=Eif5a Keywords Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Elongation factor; Endoplasmic reticulum; Hypusine; Membrane; mRNA transport; Nuclear pore complex; Nucleus; Phosphoprotein; Protein biosynthesis; Protein transport; Reference proteome; RNA-binding; Translocation; Transport. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL BC101891; AAI01892.1; -; mRNA IPI IPI00211216; -; . RefSeq NP_001028853.1; NM_001033681.1; . UniGene Rn.128212; -; . ProteinModelPortal Q3T1J1; -; . SMR Q3T1J1; 15-150; . IntAct Q3T1J1; 1; . STRING Q3T1J1; -; . PhosphoSite Q3T1J1; -; . PRIDE Q3T1J1; -; . Ensembl ENSRNOT00000022343; ENSRNOP00000022343; ENSRNOG00000016478; . GeneID 287444; -; . KEGG rno:287444; -; . UCSC NM_001033681; rat; . CTD 1984; -; . RGD 1308029; Eif5a; . eggNOG maNOG16112; -; . GeneTree ENSGT00390000003738; -; . HOVERGEN HBG001104; -; . InParanoid Q3T1J1; -; . OMA NGDLRED; -; . OrthoDB EOG41JZDF; -; . PhylomeDB Q3T1J1; -; . NextBio 626163; -; . ArrayExpress Q3T1J1; -; . Genevestigator Q3T1J1; -; . GermOnline ENSRNOG00000016478; Rattus norvegicus; . GO GO:0030425; C:dendrite; IDA:RGD; . GO GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell; . GO GO:0043025; C:neuronal cell body; IDA:RGD; . GO GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell; . GO GO:0043022; F:ribosome binding; IEA:InterPro; . GO GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW; . GO GO:0007568; P:aging; IEP:RGD; . GO GO:0051028; P:mRNA transport; IEA:UniProtKB-KW; . GO GO:0043066; P:negative regulation of apoptosis; IMP:RGD; . GO GO:0008612; P:peptidyl-lysine modification to hypusine; IEA:InterPro; . GO GO:0051149; P:positive regulation of muscle cell differentiation; IMP:RGD; . GO GO:0045901; P:positive regulation of translational elongation; IEA:InterPro; . GO GO:0045905; P:positive regulation of translational termination; IEA:InterPro; . GO GO:0015031; P:protein transport; IEA:UniProtKB-KW; . GO GO:0006452; P:translational frameshifting; IEA:InterPro; . InterPro IPR005824; KOW; . InterPro IPR012340; NA-bd_OB-fold; . InterPro IPR016027; NA-bd_OB-fold-like; . InterPro IPR019769; Trans_elong_IF5A_hypusine_site; . InterPro IPR001884; Transl_elong_IF5A; . InterPro IPR020189; Transl_elong_IF5A_C; . InterPro IPR014722; Transl_SH3-like_sub; . InterPro IPR008991; Translation_prot_SH3-like; . Gene3D G3DSA:2.40.50.140; OB_NA_bd_sub; 1; . Gene3D G3DSA:2.30.30.30; Ribosomal_L2; 1; . KO K03263; -; . PANTHER PTHR11673; EIF5A_hypusine; 1; . Pfam PF01287; eIF-5a; 1; . Pfam PF00467; KOW; 1; . PIRSF PIRSF003025; eIF5A; 1; . SUPFAM SSF50249; Nucleic_acid_OB; 1; . SUPFAM SSF50104; Transl_SH3_like; 1; . TIGRFAMs TIGR00037; EIF_5A; 1; . PROSITE PS00302; IF5A_HYPUSINE; 1; . World-2DPAGE Repository (search AC)