World-2DPAGE Home
Home  |  Contact
Due to scheduled maintenance work, this service will not be available from Tuesday August 23rd 06:00 pm until Wednesday August 24th 08:00 am CEST. Apologies for the inconvenience.

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 
Maps  [experimental info] 
[protein list] 
[graphical interface]
     Databases

use 'Ctrl' to select several
databases

Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
has only effect if a remote
interface is selected
     
Searching in 'World-2DPAGE Repository [0014]' for entry matching: P01946




World-2DPAGE Repository (0014):  P01946

P01946


General information about the entry
View entry in simple text format
Entry nameHBA_RAT
Primary accession numberP01946
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Hemoglobin subunit alpha-1/2; AltName: Full=Alpha-1/2-globin; AltName: Full=Hemoglobin alpha-1/2 chain;.
Gene nameName=Hba1
Synonyms=Hba-a1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.200900680;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
RAT_CEREBELLUM_21D
  map experimental info 		 
RAT_CEREBELLUM_21D

MAP LOCATIONS:
pI=8.34; Mw=9000  [identification data]

IDENTIFICATION: SPOT 3324: SeqCov=79%. MascotPMF=86 [1].
MAPPING (identification):
SPOT 3324: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE10017.
UniProtKB/Swiss-ProtP01946; HBA_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameHBA_RAT
Primary accession numberP01946
Secondary accession number(s) P33583 Q63243 Q80XV2 Q91V15
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on November 16, 2011 (version 105)
Name and origin of the protein
DescriptionRecName: Full=Hemoglobin subunit alpha-1/2; AltName: Full=Alpha-1/2-globin; AltName: Full=Hemoglobin alpha-1/2 chain;
Gene nameName=Hba1
Synonyms=Hba-a1
Encoded onName=Hba1; Synonyms=Hba-a1
Keywords3D-structure; Complete proteome; Direct protein sequencing; Heme; Iron; Metal-binding; Oxygen transport; Polymorphism; Reference proteome; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM17083; AAA41308.1; -; mRNA
EMBLX56325; CAA39764.1; -; Genomic_DNA
EMBLX65495; CAA46476.1; -; Genomic_DNA
EMBLU29528; AAA99054.1; -; Genomic_DNA
EMBLBC059150; AAH59150.1; -; mRNA
EMBLBC091567; AAH91567.1; -; mRNA
EMBLS66657; AAP13984.1; -; Genomic_DNA
EMBLM32510; AAA41315.1; -; mRNA
IPIIPI00287835; -; .
PIRI54239; HART1; .
RefSeqNP_001007723.1; NM_001007722.1; .
RefSeqNP_037228.1; NM_013096.1; .
UniGeneRn.107334; -; .
UniGeneRn.203003; -; .
PDB3DHT; X-ray; 2.98 A; A=2-142
PDB3HF4; X-ray; 2.70 A; A/E=2-142
PDBsum3DHT; -; .
PDBsum3HF4; -; .
ProteinModelPortalP01946; -; .
SMRP01946; 2-142; .
IntActP01946; 1; .
STRINGP01946; -; .
PhosphoSiteP01946; -; .
Rat-heart-2DPAGEP01946; -; .
PRIDEP01946; -; .
EnsemblENSRNOT00000048977; ENSRNOP00000044081; ENSRNOG00000031686; .
EnsemblENSRNOT00000051483; ENSRNOP00000044233; ENSRNOG00000029886; .
GeneID25632; -; .
GeneID360504; -; .
KEGGrno:25632; -; .
KEGGrno:360504; -; .
UCSCNM_013096; rat; .
CTD110257; -; .
RGD2782; Hba-a1; .
eggNOGroNOG16000; -; .
GeneTreeENSGT00550000074190; -; .
HOVERGENHBG009709; -; .
InParanoidP01946; -; .
OMAHIDELTG; -; .
OrthoDBEOG47M209; -; .
PhylomeDBP01946; -; .
NextBio607439; -; .
GenevestigatorP01946; -; .
GermOnlineENSRNOG00000029886; Rattus norvegicus; .
GOGO:0005833; C:hemoglobin complex; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0001540; F:beta-amyloid binding; IDA:RGD; .
GOGO:0020037; F:heme binding; IDA:RGD; .
GOGO:0043177; F:organic acid binding; IPI:RGD; .
GOGO:0019825; F:oxygen binding; IEA:InterPro; .
GOGO:0005344; F:oxygen transporter activity; IC:RGD; .
GOGO:0045776; P:negative regulation of blood pressure; IMP:RGD; .
GOGO:0051291; P:protein heterooligomerization; IDA:RGD; .
GOGO:0051930; P:regulation of sensory perception of pain; IMP:RGD; .
InterProIPR009050; Globin-like; .
InterProIPR012292; Globin_dom; .
InterProIPR000971; Globin_subset; .
InterProIPR002338; Haemoglobin_a; .
InterProIPR018331; Haemoglobin_alpha_chain; .
InterProIPR002339; Haemoglobin_pi; .
Gene3DG3DSA:1.10.490.10; Globin_related; 1; .
KOK13822; -; .
PANTHERPTHR11442:SF14; Pi_haem; 1; .
PfamPF00042; Globin; 1; .
PRINTSPR00612; ALPHAHAEM; .
PRINTSPR00815; PIHAEM; .
SUPFAMSSF46458; Globin_like; 1; .
PROSITEPS01033; GLOBIN; 1; .


World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server