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Searching in 'World-2DPAGE Repository [0019]' for entry matching: P04182

World-2DPAGE Repository (0019):  P04182


General information about the entry
View entry in simple text format
Entry nameOAT_RAT
Primary accession numberP04182
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Ornithine aminotransferase, mitochondrial; EC=; AltName: Full=Ornithine--oxo-acid aminotransferase; Flags: Precursor;.
Gene nameName=Oat
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
  map experimental info

pI=6.53; Mw=48701  [identification data]

IDENTIFICATION: SPOT 523: Peptides number=4. SeqCov=13%. MOWSE score=2.72E+5 [1].
MAPPING (identification):
SPOT 523: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Willard Freeman, Penn State College of Medicine, USA
UniProtKB/Swiss-ProtP04182; OAT_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameOAT_RAT
Primary accession numberP04182
Secondary accession number(s) Q6LDF6 Q6LDF7
Sequence was last modified on March 20, 1987 (version 1)
Annotations were last modified on November 16, 2011 (version 107)
Name and origin of the protein
DescriptionRecName: Full=Ornithine aminotransferase, mitochondrial; EC=; AltName: Full=Ornithine--oxo-acid aminotransferase; Flags: Precursor;
Gene nameName=Oat
Encoded onName=Oat
KeywordsAminotransferase; Complete proteome; Direct protein sequencing; Mitochondrion; Pyridoxal phosphate; Reference proteome; Transferase; Transit peptide.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLM11842; AAA41766.1; -; mRNA
EMBLBC061551; AAH61551.1; -; mRNA
EMBLM93296; AAA42060.1; -; Genomic_DNA
EMBLM93295; AAA42060.1; JOINED; Genomic_DNA
EMBLM93301; AAA42061.1; -; Genomic_DNA
EMBLM93297; AAA42061.1; JOINED; Genomic_DNA
EMBLM93298; AAA42061.1; JOINED; Genomic_DNA
EMBLM93299; AAA42061.1; JOINED; Genomic_DNA
EMBLM93300; AAA42061.1; JOINED; Genomic_DNA
IPIIPI00193279; -; .
PIRA00600; XNRTO; .
RefSeqNP_071966.1; NM_022521.2; .
UniGeneRn.1430; -; .
ProteinModelPortalP04182; -; .
SMRP04182; 36-439; .
IntActP04182; 1; .
STRINGP04182; -; .
PhosphoSiteP04182; -; .
PRIDEP04182; -; .
EnsemblENSRNOT00000022628; ENSRNOP00000022628; ENSRNOG00000016807; .
GeneID64313; -; .
KEGGrno:64313; -; .
NMPDRfig|10116.3.peg.3136; -; .
UCSCNM_022521; rat; .
CTD4942; -; .
RGD621724; Oat; .
eggNOGroNOG11436; -; .
GeneTreeENSGT00530000062907; -; .
HOVERGENHBG000434; -; .
InParanoidP04182; -; .
OrthoDBEOG4MSCZ6; -; .
PhylomeDBP04182; -; .
NextBio612984; -; .
ArrayExpressP04182; -; .
GenevestigatorP04182; -; .
GermOnlineENSRNOG00000016807; Rattus norvegicus; .
GOGO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell; .
GOGO:0003992; F:N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity; TAS:RGD; .
GOGO:0004587; F:ornithine-oxo-acid transaminase activity; IEA:EC; .
GOGO:0030170; F:pyridoxal phosphate binding; IEA:InterPro; .
GOGO:0006591; P:ornithine metabolic process; TAS:RGD; .
InterProIPR005814; Aminotrans_3; .
InterProIPR010164; Orn_aminotrans; .
InterProIPR015424; PyrdxlP-dep_Trfase_major_dom; .
InterProIPR015421; PyrdxlP-dep_Trfase_major_sub1; .
InterProIPR015422; PyrdxlP-dep_Trfase_major_sub2; .
Gene3DG3DSA:3.40.640.10; PyrdxlP-dep_Trfase_major_sub1; 1; .
Gene3DG3DSA:3.90.1150.10; PyrdxlP-dep_Trfase_major_sub2; 2; .
KOK00819; -; .
PANTHERPTHR11986; Aminotrans_3; 1; .
PANTHERPTHR11986:SF18; Orn_aminotrans; 1; .
PfamPF00202; Aminotran_3; 1; .
SUPFAMSSF53383; PyrdxlP-dep_Trfase_major; 1; .
TIGRFAMsTIGR01885; Orn_aminotrans; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server