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Searching in 'World-2DPAGE Repository [0019]' for entry matching: P05213




World-2DPAGE Repository (0019):  P05213


P05213


General information about the entry
View entry in simple text format
Entry nameTBA1B_MOUSE
Primary accession numberP05213
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Tubulin alpha-1B chain; AltName: Full=Alpha-tubulin 2; AltName: Full=Alpha-tubulin isotype M-alpha-2; AltName: Full=Tubulin alpha-2 chain;.
Gene nameName=Tuba1b
Synonyms=Tuba2
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1111/j.1471-4159.2010.06719.x;
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
HIPP_SYNAP
  map experimental info
 
HIPP_SYNAP

MAP LOCATIONS:
pI=4.94; Mw=50803  [identification data]
pI=4.94; Mw=50803  [identification data]

IDENTIFICATION: SPOT 1056: Peptides number=10. SeqCov=32.8%. MOWSE score=7.31E+8 [1]
SPOT 1156: Peptides number=10. SeqCov=32.8%. MOWSE score=9.22E+10 [1].
MAPPING (identification):
SPOT 1056: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 1156: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Willard Freeman, Penn State College of Medicine, USA
Cross-references
UniProtKB/Swiss-ProtP05213; TBA1B_MOUSE.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameTBA1B_MOUSE
Primary accession numberP05213
Secondary accession number(s) Q3TY23 Q3U8B1 Q3UAW8 Q4KMW2
Sequence was last modified on November 23, 2004 (version 2)
Annotations were last modified on November 16, 2011 (version 119)
Name and origin of the protein
DescriptionRecName: Full=Tubulin alpha-1B chain; AltName: Full=Alpha-tubulin 2; AltName: Full=Alpha-tubulin isotype M-alpha-2; AltName: Full=Tubulin alpha-2 chain;
Gene nameName=Tuba1b
Synonyms=Tuba2
Encoded onName=Tuba1b; Synonyms=Tuba2
KeywordsAcetylation; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; GTP-binding; Isopeptide bond; Methylation; Microtubule; Nucleotide-binding; Phosphoprotein; Reference proteome; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM13446; AAA40500.1; -; mRNA
EMBLAK075955; BAC36080.1; -; mRNA
EMBLAK137885; BAE23512.1; -; mRNA
EMBLAK150128; BAE29327.1; -; mRNA
EMBLAK150179; BAE29362.1; -; mRNA
EMBLAK150968; BAE29999.1; -; mRNA
EMBLAK151199; BAE30196.1; -; mRNA
EMBLAK151809; BAE30708.1; -; mRNA
EMBLAK152298; BAE31107.1; -; mRNA
EMBLAK153064; BAE31690.1; -; mRNA
EMBLAK153254; BAE31845.1; -; mRNA
EMBLAK158958; BAE34741.1; -; mRNA
EMBLAK164428; BAE37783.1; -; mRNA
EMBLAK168770; BAE40606.1; -; mRNA
EMBLAK169075; BAE40860.1; -; mRNA
EMBLAK169092; BAE40875.1; -; mRNA
EMBLAK169130; BAE40909.1; -; mRNA
EMBLAK169665; BAE41287.1; -; mRNA
EMBLBC002219; AAH02219.1; -; mRNA
EMBLBC008117; AAH08117.1; -; mRNA
EMBLBC063777; AAH63777.1; -; mRNA
EMBLBC083120; AAH83120.1; -; mRNA
EMBLBC098321; AAH98321.1; -; mRNA
EMBLBC108337; AAI08338.1; -; mRNA
EMBLBC108394; AAI08395.1; -; mRNA
EMBLM28727; AAA40507.1; -; mRNA
IPIIPI00117348; -; .
PIRI77425; I77425; .
PIRS29013; A61275; .
RefSeqNP_035784.1; NM_011654.2; .
UniGeneMm.343377; -; .
UniGeneMm.392113; -; .
ProteinModelPortalP05213; -; .
SMRP05213; 1-440; .
IntActP05213; 13; .
STRINGP05213; -; .
PhosphoSiteP05213; -; .
REPRODUCTION-2DPAGEP05213; -; .
PRIDEP05213; -; .
EnsemblENSMUST00000077577; ENSMUSP00000076777; ENSMUSG00000023004; .
GeneID22143; -; .
KEGGmmu:22143; -; .
CTD10376; -; .
MGIMGI:107804; Tuba1b; .
eggNOGroNOG14794; -; .
HOGENOMHBG750007; -; .
HOVERGENHBG000089; -; .
InParanoidP05213; -; .
OMAVGIDSTT; -; .
OrthoDBEOG44J2HZ; -; .
PhylomeDBP05213; -; .
ReactomeREACT_17056; Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding; .
ReactomeREACT_93132; Metabolism of proteins; .
NextBio302042; -; .
BgeeP05213; -; .
CleanExMM_TUBA1B; -; .
GenevestigatorP05213; -; .
GermOnlineENSMUSG00000023004; Mus musculus; .
GOGO:0005881; C:cytoplasmic microtubule; IDA:MGI; .
GOGO:0005829; C:cytosol; TAS:Reactome; .
GOGO:0005525; F:GTP binding; IEA:UniProtKB-KW; .
GOGO:0003924; F:GTPase activity; IEA:InterPro; .
GOGO:0005200; F:structural constituent of cytoskeleton; IDA:MGI; .
GOGO:0000226; P:microtubule cytoskeleton organization; IDA:MGI; .
GOGO:0007018; P:microtubule-based movement; IEA:InterPro; .
GOGO:0006457; P:protein folding; TAS:Reactome; .
GOGO:0051258; P:protein polymerization; IEA:InterPro; .
InterProIPR002452; Alpha_tubulin; .
InterProIPR008280; Tub_FtsZ_C; .
InterProIPR000217; Tubulin; .
InterProIPR018316; Tubulin/FtsZ_2-layer-sand-dom; .
InterProIPR023123; Tubulin_C; .
InterProIPR017975; Tubulin_CS; .
InterProIPR003008; Tubulin_FtsZ_GTPase; .
Gene3DG3DSA:3.30.1330.20; Tubulin/FtsZ_2-layer-sand-dom; 1; .
Gene3DG3DSA:1.10.287.600; Tubulin_C; 1; .
Gene3DG3DSA:3.40.50.1440; Tubulin_FtsZ; 1; .
KOK07374; -; .
PANTHERPTHR11588; Tubulin; 1; .
PfamPF00091; Tubulin; 1; .
PfamPF03953; Tubulin_C; 1; .
PRINTSPR01162; ALPHATUBULIN; .
PRINTSPR01161; TUBULIN; .
SMARTSM00864; Tubulin; 1; .
SMARTSM00865; Tubulin_C; 1; .
SUPFAMSSF55307; Tub_FtsZ_C; 1; .
SUPFAMSSF52490; Tubulin_FtsZ; 1; .
PROSITEPS00227; TUBULIN; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server