resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained.
It will be discontinued on 31-May-2024.

Swiss-2DPAGE data (text records and image files) will continue to be available from

World-2DPAGE Repository no longer accepts submissions.

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]


use 'Ctrl' to select several

Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0019]' for entry matching: P07895

World-2DPAGE Repository (0019):  P07895


General information about the entry
View entry in simple text format
Entry nameSODM_RAT
Primary accession numberP07895
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Superoxide dismutase [Mn], mitochondrial; EC=; Flags: Precursor;.
Gene nameName=Sod2
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
  map experimental info

pI=8.96; Mw=24895  [identification data]

IDENTIFICATION: SPOT 1047: Peptides number=6. SeqCov=32.4%. MOWSE score=1.74E+5 [1].
MAPPING (identification):
SPOT 1047: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Willard Freeman, Penn State College of Medicine, USA
UniProtKB/Swiss-ProtP07895; SODM_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameSODM_RAT
Primary accession numberP07895
Sequence was last modified on May 1, 1992 (version 2)
Annotations were last modified on November 16, 2011 (version 110)
Name and origin of the protein
DescriptionRecName: Full=Superoxide dismutase [Mn], mitochondrial; EC=; Flags: Precursor;
Gene nameName=Sod2
Encoded onName=Sod2
KeywordsAcetylation; Complete proteome; Direct protein sequencing; Manganese; Metal-binding; Mitochondrion; Nitration; Oxidoreductase; Reference proteome; Transit peptide.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLY00497; CAA68549.1; -; mRNA
EMBLX56600; CAA39937.1; -; Genomic_DNA
EMBLBC070913; AAH70913.1; -; mRNA
IPIIPI00211593; -; .
PIRS21661; DSRTN; .
RefSeqNP_058747.1; NM_017051.2; .
UniGeneRn.10488; -; .
ProteinModelPortalP07895; -; .
SMRP07895; 25-222; .
IntActP07895; 1; .
STRINGP07895; -; .
PhosphoSiteP07895; -; .
Rat-heart-2DPAGEP07895; -; .
World-2DPAGE0004:P07895; -; .
PRIDEP07895; -; .
EnsemblENSRNOT00000025794; ENSRNOP00000025794; ENSRNOG00000019048; .
GeneID24787; -; .
KEGGrno:24787; -; .
UCSCNM_017051; rat; .
CTD6648; -; .
RGD3732; Sod2; .
eggNOGroNOG14008; -; .
GeneTreeENSGT00390000011877; -; .
HOVERGENHBG004451; -; .
InParanoidP07895; -; .
OrthoDBEOG4R503R; -; .
PhylomeDBP07895; -; .
NextBio604412; -; .
ArrayExpressP07895; -; .
GenevestigatorP07895; -; .
GermOnlineENSRNOG00000019048; Rattus norvegicus; .
GOGO:0042645; C:mitochondrial nucleoid; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0003677; F:DNA binding; IDA:RGD; .
GOGO:0042802; F:identical protein binding; IDA:RGD; .
GOGO:0030145; F:manganese ion binding; ISS:UniProtKB; .
GOGO:0019825; F:oxygen binding; IDA:RGD; .
GOGO:0004784; F:superoxide dismutase activity; ISS:UniProtKB; .
GOGO:0001315; P:age-dependent response to reactive oxygen species; ISS:UniProtKB; .
GOGO:0006916; P:anti-apoptosis; IMP:RGD; .
GOGO:0071361; P:cellular response to ethanol; IEP:RGD; .
GOGO:0050665; P:hydrogen peroxide biosynthetic process; IDA:RGD; .
GOGO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB; .
GOGO:0019430; P:removal of superoxide radicals; IDA:RGD; .
GOGO:0046686; P:response to cadmium ion; IEP:RGD; .
GOGO:0042493; P:response to drug; IDA:RGD; .
GOGO:0051602; P:response to electrical stimulus; IEP:RGD; .
GOGO:0042542; P:response to hydrogen peroxide; IEP:RGD; .
GOGO:0001666; P:response to hypoxia; IEP:RGD; .
GOGO:0033591; P:response to L-ascorbic acid; IEP:RGD; .
GOGO:0032496; P:response to lipopolysaccharide; IEP:RGD; .
GOGO:0010042; P:response to manganese ion; IEP:RGD; .
GOGO:0010269; P:response to selenium ion; IEP:RGD; .
GOGO:0034021; P:response to silicon dioxide; IEP:RGD; .
GOGO:0010043; P:response to zinc ion; IEP:RGD; .
InterProIPR001189; Mn/Fe_SOD; .
InterProIPR019833; Mn/Fe_SOD_BS; .
InterProIPR019832; Mn/Fe_SOD_C; .
InterProIPR019831; Mn/Fe_SOD_N; .
KOK04564; -; .
PANTHERPTHR11404; SODismutase; 1; .
PfamPF02777; Sod_Fe_C; 1; .
PfamPF00081; Sod_Fe_N; 1; .
PIRSFPIRSF000349; SODismutase; 1; .
SUPFAMSSF46609; SODismutase; 1; .
SUPFAMSSF54719; SODismutase; 1; .
PROSITEPS00088; SOD_MN; 1; .

World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server