resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained.

World-2DPAGE Repository no longer accepts submissions.


World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Databases

use 'Ctrl' to select several
databases


Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
     
Searching in 'World-2DPAGE Repository [0054]' for entry matching: P12004




World-2DPAGE Repository (0054):  P12004


P12004


General information about the entry
View entry in simple text format
Entry namePCNA_HUMAN
Primary accession numberP12004
integrated into World-2DPAGE Repository (0054) on November 28, 2012 (release 1)
2D Annotations were last modified onNovember 28, 2012 (version 1)
General Annotations were last modified on October 23, 2014 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Proliferating cell nuclear antigen; Short=PCNA; AltName: Full=Cyclin;.
Gene nameName=PCNA
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
DOI=10.1074/mcp.M112.022947;
Vernocchi S., Battello N., Schmitz S., Revets D., Billing A.M., Turner J.D., Muller C.P.
''Membrane glucocorticoid receptor activation induces proteomic changes aligning with classical glucocorticoid-effects''
Molecular & Cellular Proteomics 12(7):1764-1779 (2013)
2D PAGE maps for identified proteins
How to interpret a protein

HSAPIENS_CCRF-CEM_3-10 {CCRF-CEM cells stimulated with Cort-BSA (internal standard)}
Homo sapiens (Human)
HSAPIENS_CCRF-CEM_3-10
  map experimental info
 
HSAPIENS_CCRF-CEM_3-10

MAP LOCATIONS:
pI=4.57; Mw=28769  [identification data]

%COV: SPOT 941: 73 [1].
SCORE: SPOT 941: 801 [1].
SEARCH ENGINE: SPOT 941: Mascot [1].
MAPPING (identification):
SPOT 941: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Claude P. Muller, Centre de Recherche Public de la Sante / National Public Health Laboratory, Luxembourg
Cross-references
UniProtKB/Swiss-ProtP12004; PCNA_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry namePCNA_HUMAN
Primary accession numberP12004
Secondary accession number(s) B2R897 D3DW02
Sequence was last modified on October 1, 1989 (version 1)
Annotations were last modified on October 1, 2014 (version 171)
Name and origin of the protein
DescriptionRecName: Full=Proliferating cell nuclear antigen; Short=PCNA; AltName: Full=Cyclin;
Gene nameName=PCNA
Encoded onName=PCNA
Keywords3D-structure; Acetylation; Complete proteome; Direct protein sequencing; DNA damage; DNA repair; DNA replication; DNA-binding; Isopeptide bond; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM15796; AAA35736.1; -; mRNA
EMBLJ04718; AAA60040.1; -; Genomic_DNA
EMBLAF527838; AAM78556.1; -; Genomic_DNA
EMBLAK313286; BAG36094.1; -; mRNA
EMBLAL121924; CAC27344.1; -; Genomic_DNA
EMBLCH471133; EAX10428.1; -; Genomic_DNA
EMBLCH471133; EAX10429.1; -; Genomic_DNA
EMBLCH471133; EAX10430.1; -; Genomic_DNA
EMBLBC000491; AAH00491.1; -; mRNA
EMBLBC062439; AAH62439.1; -; mRNA
CCDSCCDS13087.1; -; .
PIRA27445; WMHUET; .
RefSeqNP_002583.1; NM_002592.2; .
RefSeqNP_872590.1; NM_182649.1; .
UniGeneHs.147433; -; .
UniGeneHs.744934; -; .
PDB1AXC; X-ray; 2.60 A; A/C/E=1-261
PDB1U76; X-ray; 2.60 A; A/C/E=1-261
PDB1U7B; X-ray; 1.88 A; A=1-261
PDB1UL1; X-ray; 2.90 A; A/B/C=1-261
PDB1VYJ; X-ray; 2.80 A; A/C/E/G/I/K=1-261
PDB1VYM; X-ray; 2.30 A; A/B/C=1-261
PDB1W60; X-ray; 3.15 A; A/B=1-261
PDB2ZVK; X-ray; 2.70 A; A/B/C=1-261
PDB2ZVL; X-ray; 2.50 A; A/B/C/D/E/F=1-261
PDB2ZVM; X-ray; 2.30 A; A/B/C=1-261
PDB3P87; X-ray; 2.99 A; A/B/C/D/E/F=1-261
PDB3TBL; X-ray; 2.90 A; A/B/C=1-261
PDB3VKX; X-ray; 2.10 A; A=1-261
PDB3WGW; X-ray; 2.80 A; A/B=1-261
PDBsum1AXC; -; .
PDBsum1U76; -; .
PDBsum1U7B; -; .
PDBsum1UL1; -; .
PDBsum1VYJ; -; .
PDBsum1VYM; -; .
PDBsum1W60; -; .
PDBsum2ZVK; -; .
PDBsum2ZVL; -; .
PDBsum2ZVM; -; .
PDBsum3P87; -; .
PDBsum3TBL; -; .
PDBsum3VKX; -; .
PDBsum3WGW; -; .
ProteinModelPortalP12004; -; .
SMRP12004; 1-255; .
BioGrid111142; 222; .
DIPDIP-1098N; -; .
IntActP12004; 52; .
MINTMINT-5000943; -; .
STRING9606.ENSP00000368438; -; .
ChEMBLCHEMBL2346488; -; .
PhosphoSiteP12004; -; .
DMDM129694; -; .
SWISS-2DPAGEP12004; -; .
MaxQBP12004; -; .
PaxDbP12004; -; .
PeptideAtlasP12004; -; .
PRIDEP12004; -; .
DNASU5111; -; .
EnsemblENST00000379143; ENSP00000368438; ENSG00000132646; .
EnsemblENST00000379160; ENSP00000368458; ENSG00000132646; .
GeneID5111; -; .
KEGGhsa:5111; -; .
UCSCuc002wlp.3; human; .
CTD5111; -; .
GeneCardsGC20M005095; -; .
HGNCHGNC:8729; PCNA; .
HPACAB000148; -; .
HPAHPA030521; -; .
HPAHPA030522; -; .
HPAHPA030523; -; .
MIM176740; gene; .
neXtProtNX_P12004; -; .
PharmGKBPA263; -; .
eggNOGCOG0592; -; .
HOGENOMHOG000211098; -; .
HOVERGENHBG000947; -; .
InParanoidP12004; -; .
KOK04802; -; .
OMAMKLMNLD; -; .
OrthoDBEOG7JX34W; -; .
PhylomeDBP12004; -; .
TreeFamTF313441; -; .
ReactomeREACT_111214; G0 and Early G1; .
ReactomeREACT_1385; Processive synthesis on the lagging strand; .
ReactomeREACT_1792; Polymerase switching; .
ReactomeREACT_1838; Leading Strand Synthesis; .
ReactomeREACT_1993; Repair synthesis for gap-filling by DNA polymerase in TC-NER; .
ReactomeREACT_2192; Removal of DNA patch containing abasic residue; .
ReactomeREACT_378; Repair synthesis of patch ~27-30 bases long by DNA polymerase; .
ReactomeREACT_471; E2F mediated regulation of DNA replication; .
ReactomeREACT_683; G1/S-Specific Transcription; .
ReactomeREACT_70; Removal of the Flap Intermediate; .
ReactomeREACT_7961; Telomere C-strand (Lagging Strand) Synthesis; .
ReactomeREACT_7987; Polymerase switching on the C-strand of the telomere; .
ReactomeREACT_7999; Removal of the Flap Intermediate from the C-strand; .
ReactomeREACT_8027; Processive synthesis on the C-strand of the telomere; .
SignaLinkP12004; -; .
ChiTaRSPCNA; human; .
EvolutionaryTraceP12004; -; .
GeneWikiProliferating_cell_nuclear_antigen; -; .
GenomeRNAi5111; -; .
NextBio19722; -; .
PROPR:P12004; -; .
BgeeP12004; -; .
CleanExHS_PCNA; -; .
GenevestigatorP12004; -; .
GOGO:0005813; C:centrosome; IDA:MGI; .
GOGO:0005737; C:cytoplasm; IDA:HPA; .
GOGO:0005663; C:DNA replication factor C complex; TAS:UniProtKB; .
GOGO:0070062; C:extracellular vesicular exosome; IDA:UniProt; .
GOGO:0043596; C:nuclear replication fork; IDA:BHF-UCL; .
GOGO:0005654; C:nucleoplasm; TAS:Reactome; .
GOGO:0005634; C:nucleus; IDA:HPA; .
GOGO:0043626; C:PCNA complex; IBA:RefGenome; .
GOGO:0070557; C:PCNA-p21 complex; IDA:UniProtKB; .
GOGO:0032139; F:dinucleotide insertion or deletion binding; IDA:BHF-UCL; .
GOGO:0070182; F:DNA polymerase binding; IPI:UniProt; .
GOGO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro; .
GOGO:0042802; F:identical protein binding; IPI:IntAct; .
GOGO:0032405; F:MutLalpha complex binding; IDA:HGNC; .
GOGO:0005515; F:protein binding; IPI:UniProtKB; .
GOGO:0000701; F:purine-specific mismatch base pair DNA N-glycosylase activity; IDA:BHF-UCL; .
GOGO:0030971; F:receptor tyrosine kinase binding; IPI:UniProtKB; .
GOGO:0006284; P:base-excision repair; TAS:Reactome; .
GOGO:0008283; P:cell proliferation; TAS:ProtInc; .
GOGO:0006281; P:DNA repair; NAS:UniProtKB; .
GOGO:0006260; P:DNA replication; NAS:UniProtKB; .
GOGO:0006271; P:DNA strand elongation involved in DNA replication; TAS:Reactome; .
GOGO:0030855; P:epithelial cell differentiation; IEP:UniProt; .
GOGO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome; .
GOGO:0007507; P:heart development; IEA:Ensembl; .
GOGO:0006272; P:leading strand elongation; IBA:RefGenome; .
GOGO:0006298; P:mismatch repair; IDA:BHF-UCL; .
GOGO:0000278; P:mitotic cell cycle; TAS:Reactome; .
GOGO:0006289; P:nucleotide-excision repair; TAS:Reactome; .
GOGO:0006297; P:nucleotide-excision repair; DNA gap filling; TAS:Reactome
GOGO:0048015; P:phosphatidylinositol-mediated signaling; NAS:UniProtKB; .
GOGO:0032077; P:positive regulation of deoxyribonuclease activity; IDA:UniProtKB; .
GOGO:0006275; P:regulation of DNA replication; IEA:InterPro; .
GOGO:0000083; P:regulation of transcription involved in G1/S transition of mitotic cell cycle; TAS:Reactome; .
GOGO:0046686; P:response to cadmium ion; IEA:Ensembl; .
GOGO:0033993; P:response to lipid; IEA:Ensembl; .
GOGO:0000723; P:telomere maintenance; TAS:Reactome; .
GOGO:0000722; P:telomere maintenance via recombination; TAS:Reactome; .
GOGO:0032201; P:telomere maintenance via semi-conservative replication; TAS:Reactome; .
GOGO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome; .
GOGO:0019985; P:translesion synthesis; IDA:UniProtKB; .
HAMAPMF_00317; DNApol_clamp_arch; 1; .
InterProIPR000730; Pr_cel_nuc_antig; .
InterProIPR022649; Pr_cel_nuc_antig_C; .
InterProIPR022659; Pr_cel_nuc_antig_CS; .
InterProIPR022648; Pr_cel_nuc_antig_N; .
PANTHERPTHR11352; PTHR11352; 1; .
PfamPF02747; PCNA_C; 1; .
PfamPF00705; PCNA_N; 1; .
PRINTSPR00339; PCNACYCLIN; .
TIGRFAMsTIGR00590; pcna; 1; .
PROSITEPS01251; PCNA_1; 1; .
PROSITEPS00293; PCNA_2; 1; .



World-2DPAGE Repository image

World-2DPAGE Repository (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server