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Searching in 'World-2DPAGE Repository [0054]' for entry matching: P23381




World-2DPAGE Repository (0054):  P23381


P23381


General information about the entry
View entry in simple text format
Entry nameSYWC_HUMAN
Primary accession numberP23381
integrated into World-2DPAGE Repository (0054) on November 28, 2012 (release 1)
2D Annotations were last modified onNovember 28, 2012 (version 1)
General Annotations were last modified on October 23, 2014 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Tryptophan--tRNA ligase, cytoplasmic; EC=6.1.1.2; AltName: Full=Interferon-induced protein 53; Short=IFP53; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; Short=hWRS; Contains: RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS;.
Gene nameName=WARS
Synonyms=IFI53, WRS
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
DOI=10.1074/mcp.M112.022947;
Vernocchi S., Battello N., Schmitz S., Revets D., Billing A.M., Turner J.D., Muller C.P.
''Membrane glucocorticoid receptor activation induces proteomic changes aligning with classical glucocorticoid-effects''
Molecular & Cellular Proteomics 12(7):1764-1779 (2013)
2D PAGE maps for identified proteins
How to interpret a protein

HSAPIENS_CCRF-CEM_3-10 {CCRF-CEM cells stimulated with Cort-BSA (internal standard)}
Homo sapiens (Human)
HSAPIENS_CCRF-CEM_3-10
  map experimental info
 
HSAPIENS_CCRF-CEM_3-10

MAP LOCATIONS:
pI=5.83; Mw=53034  [identification data]

%COV: SPOT 691: 53 [1].
SCORE: SPOT 691: 518 [1].
SEARCH ENGINE: SPOT 691: Mascot [1].
MAPPING (identification):
SPOT 691: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Claude P. Muller, Centre de Recherche Public de la Sante / National Public Health Laboratory, Luxembourg
Cross-references
UniProtKB/Swiss-ProtP23381; SYWC_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameSYWC_HUMAN
Primary accession numberP23381
Secondary accession number(s) A6NGN1 A6NID3 P78535 Q502Y0 Q53XB6 Q9UDI5 Q9UDL3
Sequence was last modified on December 1, 1992 (version 2)
Annotations were last modified on October 1, 2014 (version 151)
Name and origin of the protein
DescriptionRecName: Full=Tryptophan--tRNA ligase, cytoplasmic; EC=6.1.1.2; AltName: Full=Interferon-induced protein 53; Short=IFP53; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; Short=hWRS; Contains: RecName: Full=T1-TrpRS; Contains: RecName: Full=T2-TrpRS;
Gene nameName=WARS
Synonyms=IFI53, WRS
Encoded onName=WARS; Synonyms=IFI53, WRS
Keywords3D-structure; Alternative splicing; Aminoacyl-tRNA synthetase; Angiogenesis; ATP-binding; Complete proteome; Cytoplasm; Direct protein sequencing; Ligase; Nucleotide-binding; Polymorphism; Protein biosynthesis; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM77804; AAA67324.1; -; mRNA
EMBLX59892; CAA42545.1; -; mRNA
EMBLM61715; AAA61298.1; -; mRNA
EMBLX62570; CAA44450.1; -; mRNA
EMBLBX248006; CAD62335.1; -; mRNA
EMBLAK056100; BAG51626.1; -; mRNA
EMBLAK291141; BAF83830.1; -; mRNA
EMBLAL157871; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLCH471061; EAW81700.1; -; Genomic_DNA
EMBLBC017489; AAH17489.1; -; mRNA
EMBLBC095453; AAH95453.1; -; mRNA
EMBLS82905; AAB39381.1; -; Genomic_DNA
EMBLX67920; CAB94198.1; -; Genomic_DNA
EMBLX67921; CAB94198.1; JOINED; Genomic_DNA
EMBLX67922; CAB94198.1; JOINED; Genomic_DNA
EMBLX67923; CAB94199.1; -; Genomic_DNA
EMBLX67924; CAB94199.1; JOINED; Genomic_DNA
EMBLX67925; CAB94199.1; JOINED; Genomic_DNA
EMBLX67926; CAB94199.1; JOINED; Genomic_DNA
EMBLX67927; CAB94199.1; JOINED; Genomic_DNA
EMBLX67928; CAB94199.1; JOINED; Genomic_DNA
CCDSCCDS9960.1; -. [P23381-1]; .
CCDSCCDS9961.1; -. [P23381-2]; .
PIRA41633; A41706; .
RefSeqNP_004175.2; NM_004184.3. [P23381-1]; .
RefSeqNP_776049.1; NM_173701.1. [P23381-1]; .
RefSeqNP_998810.1; NM_213645.1; .
RefSeqNP_998811.1; NM_213646.1; .
RefSeqXP_005268101.1; XM_005268044.1. [P23381-1]; .
RefSeqXP_006720311.1; XM_006720248.1. [P23381-1]; .
RefSeqXP_006720312.1; XM_006720249.1. [P23381-1]; .
UniGeneHs.497599; -; .
PDB1O5T; X-ray; 2.50 A; A=94-471
PDB1R6T; X-ray; 2.10 A; A/B=1-466
PDB1R6U; X-ray; 2.00 A; A/B=48-471
PDB1ULH; X-ray; 2.31 A; A/B=82-471
PDB2AKE; X-ray; 3.10 A; A=94-471
PDB2AZX; X-ray; 2.80 A; A/B=1-471
PDB2DR2; X-ray; 3.00 A; A=94-471
PDB2QUH; X-ray; 2.40 A; A/B=1-471
PDB2QUI; X-ray; 2.40 A; A/B=1-471
PDB2QUJ; X-ray; 2.42 A; A/B=1-471
PDB2QUK; X-ray; 2.80 A; A=1-471
PDBsum1O5T; -; .
PDBsum1R6T; -; .
PDBsum1R6U; -; .
PDBsum1ULH; -; .
PDBsum2AKE; -; .
PDBsum2AZX; -; .
PDBsum2DR2; -; .
PDBsum2QUH; -; .
PDBsum2QUI; -; .
PDBsum2QUJ; -; .
PDBsum2QUK; -; .
ProteinModelPortalP23381; -; .
SMRP23381; 82-471; .
BioGrid113292; 34; .
DIPDIP-29493N; -; .
IntActP23381; 5; .
MINTMINT-1408962; -; .
STRING9606.ENSP00000347495; -; .
DrugBankDB00150; L-Tryptophan; .
PhosphoSiteP23381; -; .
DMDM135191; -; .
OGPP23381; -; .
MaxQBP23381; -; .
PaxDbP23381; -; .
PeptideAtlasP23381; -; .
PRIDEP23381; -; .
EnsemblENST00000344102; ENSP00000339485; ENSG00000140105. [P23381-2]; .
EnsemblENST00000355338; ENSP00000347495; ENSG00000140105. [P23381-1]; .
EnsemblENST00000358655; ENSP00000351481; ENSG00000140105. [P23381-2]; .
EnsemblENST00000392882; ENSP00000376620; ENSG00000140105. [P23381-1]; .
EnsemblENST00000556645; ENSP00000451887; ENSG00000140105. [P23381-2]; .
EnsemblENST00000557135; ENSP00000451460; ENSG00000140105. [P23381-1]; .
GeneID7453; -; .
KEGGhsa:7453; -; .
UCSCuc001yhg.2; human. [P23381-1]; .
CTD7453; -; .
GeneCardsGC14M100800; -; .
HGNCHGNC:12729; WARS; .
HPAHPA018944; -; .
MIM191050; gene; .
neXtProtNX_P23381; -; .
PharmGKBPA37340; -; .
eggNOGCOG0180; -; .
HOVERGENHBG002325; -; .
InParanoidP23381; -; .
KOK01867; -; .
OMAKTFIFNN; -; .
OrthoDBEOG7T4MK3; -; .
PhylomeDBP23381; -; .
TreeFamTF105669; -; .
ReactomeREACT_15306; Cytosolic tRNA aminoacylation; .
ChiTaRSWARS; human; .
EvolutionaryTraceP23381; -; .
GeneWikiWARS_(gene); -; .
GenomeRNAi7453; -; .
NextBio29178; -; .
PROPR:P23381; -; .
ArrayExpressP23381; -; .
BgeeP23381; -; .
CleanExHS_WARS; -; .
GenevestigatorP23381; -; .
GOGO:0005737; C:cytoplasm; TAS:UniProtKB; .
GOGO:0005829; C:cytosol; TAS:Reactome; .
GOGO:0070062; C:extracellular vesicular exosome; IDA:UniProt; .
GOGO:0005634; C:nucleus; IDA:UniProt; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0005515; F:protein binding; IPI:UniProtKB; .
GOGO:0004830; F:tryptophan-tRNA ligase activity; NAS:UniProtKB; .
GOGO:0001525; P:angiogenesis; IEA:UniProtKB-KW; .
GOGO:0010467; P:gene expression; TAS:Reactome; .
GOGO:0008285; P:negative regulation of cell proliferation; TAS:ProtInc; .
GOGO:0045765; P:regulation of angiogenesis; IDA:UniProtKB; .
GOGO:0006412; P:translation; TAS:ProtInc; .
GOGO:0006418; P:tRNA aminoacylation for protein translation; TAS:Reactome; .
GOGO:0006436; P:tryptophanyl-tRNA aminoacylation; NAS:UniProtKB; .
Gene3D1.10.287.10; -; 1; .
Gene3D3.40.50.620; -; 1; .
InterProIPR001412; aa-tRNA-synth_I_CS; .
InterProIPR002305; aa-tRNA-synth_Ic; .
InterProIPR014729; Rossmann-like_a/b/a_fold; .
InterProIPR009068; S15_NS1_RNA-bd; .
InterProIPR002306; Trp-tRNA-ligase; .
InterProIPR000738; WHEP-TRS; .
PANTHERPTHR10055; PTHR10055; 1; .
PfamPF00579; tRNA-synt_1b; 1; .
PfamPF00458; WHEP-TRS; 1; .
PRINTSPR01039; TRNASYNTHTRP; .
SMARTSM00991; WHEP-TRS; 1; .
SUPFAMSSF47060; SSF47060; 1; .
TIGRFAMsTIGR00233; trpS; 1; .
PROSITEPS00178; AA_TRNA_LIGASE_I; 1; .
PROSITEPS00762; WHEP_TRS_1; 1; .
PROSITEPS51185; WHEP_TRS_2; 1; .



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World-2DPAGE Repository (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server