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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0004]' for entry matching: P28073 World-2DPAGE Repository (0004):  P28073 P28073 General information about the entry View entry in simple text format Entry name PSB6_RAT Primary accession number P28073 integrated into World-2DPAGE Repository (0004) on  October 13, 2008 (release 1) 2D Annotations were last modified on May 18, 2011 (version 2) General Annotations were last modified on  December 22, 2011 (version 2) Name and origin of the protein Description RecName: Full=Proteasome subunit beta type-6; EC=3.4.25.1; AltName: Full=Macropain delta chain; AltName: Full=Multicatalytic endopeptidase complex delta chain; AltName: Full=Proteasome chain 5; AltName: Full=Proteasome delta chain; AltName: Full=Proteasome subunit Y; Flags: Precursor;. Gene name Name=Psmb6 Synonyms=Psmb6l Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009) 2D PAGE maps for identified proteins How to interpret a protein OB21DSUB {2-DE gel for Olfactory bulb proteome} Rattus norvegicus (Rat) Tissue: Olfactory bulb   map experimental info   OB21DSUB MAP LOCATIONS: SPOT 705: pI=5.08; Mw=20000   [identification data] MAPPING (identification): SPOT 705: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India Cross-references UniProtKB/Swiss-Prot P28073; PSB6_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_12 Entry name PSB6_RAT Primary accession number P28073 Secondary accession number(s) Q6IE68 Q6PDW5 Sequence was last modified on  December 20, 2005 (version 3) Annotations were last modified on  November 16, 2011 (version 108) Name and origin of the protein Description RecName: Full=Proteasome subunit beta type-6; EC=3.4.25.1; AltName: Full=Macropain delta chain; AltName: Full=Multicatalytic endopeptidase complex delta chain; AltName: Full=Proteasome chain 5; AltName: Full=Proteasome delta chain; AltName: Full=Proteasome subunit Y; Flags: Precursor; Gene name Name=Psmb6 Synonyms=Psmb6l Encoded on Name=Psmb6; Synonyms=Psmb6l Keywords Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Hydrolase; Nucleus; Protease; Proteasome; Reference proteome; Threonine protease; Zymogen. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL BC058451; AAH58451.1; -; mRNA EMBL AABR03076595; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL D10754; BAA01586.1; ALT_INIT; mRNA EMBL BN000325; CAE48380.1; -; mRNA IPI IPI00471722; -; . PIR JX0228; JX0228; . PIR S09086; S09086; . RefSeq NP_476440.2; NM_057099.2; . RefSeq XP_002725989.1; XM_002725943.1; . RefSeq XP_002729074.1; XM_002729028.1; . UniGene Rn.8118; -; . ProteinModelPortal P28073; -; . SMR P28073; 34-235; . IntAct P28073; 1; . STRING P28073; -; . World-2DPAGE 0004:P28073; -; . PRIDE P28073; -; . Ensembl ENSRNOT00000015746; ENSRNOP00000015747; ENSRNOG00000011827; . Ensembl ENSRNOT00000026507; ENSRNOP00000026507; ENSRNOG00000019551; . GeneID 100360846; -; . GeneID 100364558; -; . GeneID 29666; -; . KEGG rno:100360846; -; . KEGG rno:100364558; -; . KEGG rno:29666; -; . NMPDR fig|10116.3.peg.5412; -; . UCSC D10754; rat; . CTD 5694; -; . RGD 61881; Psmb6; . eggNOG roNOG08605; -; . GeneTree ENSGT00510000046484; -; . HOVERGEN HBG000123; -; . InParanoid P28073; -; . OMA NELPTFY; -; . OrthoDB EOG40CHHX; -; . PhylomeDB P28073; -; . NextBio 609975; -; . Genevestigator P28073; -; . GermOnline ENSRNOG00000019551; Rattus norvegicus; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; . GO GO:0005634; C:nucleus; IEA:UniProtKB-SubCell; . GO GO:0005839; C:proteasome core complex; IEA:InterPro; . GO GO:0004298; F:threonine-type endopeptidase activity; IEA:UniProtKB-KW; . GO GO:0051603; P:proteolysis involved in cellular protein catabolic process; IEA:InterPro; . InterPro IPR000243; Pept_T1A_subB; . InterPro IPR016050; Proteasome_bsu_CS; . InterPro IPR001353; Proteasome_sua/b; . InterPro IPR023333; Proteasome_suB-type; . KO K02738; -; . Pfam PF00227; Proteasome; 1; . PRINTS PR00141; PROTEASOME; . PROSITE PS00854; PROTEASOME_B_1; 1; . PROSITE PS51476; PROTEASOME_B_2; 1; . World-2DPAGE Repository (search AC)