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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0054]' for entry matching: P54727 World-2DPAGE Repository (0054):  P54727 P54727 General information about the entry View entry in simple text format Entry name RD23B_HUMAN Primary accession number P54727 integrated into World-2DPAGE Repository (0054) on  November 28, 2012 (release 1) 2D Annotations were last modified on November 28, 2012 (version 1) General Annotations were last modified on  October 23, 2014 (version 2) Name and origin of the protein Description RecName: Full=UV excision repair protein RAD23 homolog B; Short=HR23B; Short=hHR23B; AltName: Full=XP-C repair-complementing complex 58 kDa protein; Short=p58;. Gene name Name=RAD23B Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION DOI=10.1074/mcp.M112.022947; Vernocchi S., Battello N., Schmitz S., Revets D., Billing A.M., Turner J.D., Muller C.P. ''Membrane glucocorticoid receptor activation induces proteomic changes aligning with classical glucocorticoid-effects'' Molecular & Cellular Proteomics 12(7):1764-1779 (2013) 2D PAGE maps for identified proteins How to interpret a protein HSAPIENS_CCRF-CEM_3-10 {CCRF-CEM cells stimulated with Cort-BSA (internal standard)} Homo sapiens (Human)   map experimental info   HSAPIENS_CCRF-CEM_3-10 MAP LOCATIONS: SPOT 631: pI=4.77; Mw=43171   [identification data] %COV: SPOT 631: 35 [1]. SCORE: SPOT 631: 244 [1]. SEARCH ENGINE: SPOT 631: Mascot [1]. MAPPING (identification): SPOT 631: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Claude P. Muller, Centre de Recherche Public de la Sante / National Public Health Laboratory, Luxembourg Cross-references UniProtKB/Swiss-Prot P54727; RD23B_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name RD23B_HUMAN Primary accession number P54727 Secondary accession number(s) B3KWK8 G5E9P0 Q7Z5K8 Q8WUB0 Sequence was last modified on  October 1, 1996 (version 1) Annotations were last modified on  October 1, 2014 (version 148) Name and origin of the protein Description RecName: Full=UV excision repair protein RAD23 homolog B; Short=HR23B; Short=hHR23B; AltName: Full=XP-C repair-complementing complex 58 kDa protein; Short=p58; Gene name Name=RAD23B Encoded on Name=RAD23B Keywords 3D-structure; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; DNA damage; DNA repair; Nucleus; Phosphoprotein; Polymorphism; Proteasome; Reference proteome; Repeat; Ubl conjugation pathway. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL D21090; BAA04652.1; -; mRNA EMBL AY313777; AAP81008.1; -; mRNA EMBL AY165178; AAN47194.1; -; Genomic_DNA EMBL AK125226; BAG54170.1; -; mRNA EMBL AL137852; CAD13275.1; -; Genomic_DNA EMBL CH471105; EAW59016.1; -; Genomic_DNA EMBL CH471105; EAW59017.1; -; Genomic_DNA EMBL BC020973; AAH20973.1; -; mRNA CCDS CCDS59138.1; -. [P54727-2]; . CCDS CCDS6769.1; -. [P54727-1]; . PIR S44346; S44346; . RefSeq NP_001231653.1; NM_001244724.1. [P54727-2]; . RefSeq NP_002865.1; NM_002874.4. [P54727-1]; . UniGene Hs.521640; -; . PDB 1P1A; NMR; -; A=1-82 PDB 1PVE; NMR; -; A=275-342 PDB 1UEL; NMR; -; A=1-87 PDBsum 1P1A; -; . PDBsum 1PVE; -; . PDBsum 1UEL; -; . ProteinModelPortal P54727; -; . SMR P54727; 1-409; . BioGrid 111824; 234; . DIP DIP-39944N; -; . IntAct P54727; 39; . MINT MINT-5006025; -; . STRING 9606.ENSP00000350708; -; . PhosphoSite P54727; -; . DMDM 1709985; -; . OGP P54727; -; . MaxQB P54727; -; . PaxDb P54727; -; . PeptideAtlas P54727; -; . PRIDE P54727; -; . DNASU 5887; -; . Ensembl ENST00000358015; ENSP00000350708; ENSG00000119318. [P54727-1]; . Ensembl ENST00000416373; ENSP00000405623; ENSG00000119318. [P54727-2]; . GeneID 5887; -; . KEGG hsa:5887; -; . UCSC uc004bde.3; human. [P54727-1]; . CTD 5887; -; . GeneCards GC09P110045; -; . HGNC HGNC:9813; RAD23B; . HPA CAB033868; -; . HPA HPA029718; -; . HPA HPA029719; -; . HPA HPA029720; -; . MIM 600062; gene; . neXtProt NX_P54727; -; . PharmGKB PA34173; -; . eggNOG COG5272; -; . HOGENOM HOG000172162; -; . HOVERGEN HBG055042; -; . InParanoid P54727; -; . KO K10839; -; . OMA EDEMPHA; -; . OrthoDB EOG72C51D; -; . PhylomeDB P54727; -; . TreeFam TF101216; -; . Reactome REACT_257; Formation of incision complex in GG-NER; . Reactome REACT_311; Dual incision reaction in GG-NER; . Reactome REACT_476; DNA Damage Recognition in GG-NER; . ChiTaRS RAD23B; human; . EvolutionaryTrace P54727; -; . GeneWiki RAD23B; -; . GenomeRNAi 5887; -; . NextBio 22892; -; . PMAP-CutDB P54727; -; . PRO PR:P54727; -; . ArrayExpress P54727; -; . Bgee P54727; -; . CleanEx HS_RAD23B; -; . Genevestigator P54727; -; . GO GO:0005737; C:cytoplasm; IDA:HPA; . GO GO:0005654; C:nucleoplasm; TAS:Reactome; . GO GO:0005634; C:nucleus; IDA:HPA; . GO GO:0000502; C:proteasome complex; IEA:UniProtKB-KW; . GO GO:0071942; C:XPC complex; IDA:UniProtKB; . GO GO:0003684; F:damaged DNA binding; IEA:InterPro; . GO GO:0031593; F:polyubiquitin binding; IDA:UniProtKB; . GO GO:0005515; F:protein binding; IPI:UniProtKB; . GO GO:0003697; F:single-stranded DNA binding; TAS:ProtInc; . GO GO:0006281; P:DNA repair; TAS:Reactome; . GO GO:0006289; P:nucleotide-excision repair; IDA:UniProtKB; . GO GO:0000715; P:nucleotide-excision repair; DNA damage recognition; IDA:UniProtKB GO GO:0000718; P:nucleotide-excision repair; DNA damage removal; TAS:Reactome GO GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IEA:InterPro; . GO GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB; . GO GO:0007283; P:spermatogenesis; IEA:Ensembl; . Gene3D 1.10.10.540; -; 1; . InterPro IPR004806; Rad23; . InterPro IPR006636; STI1_HS-bd; . InterPro IPR009060; UBA-like; . InterPro IPR015940; UBA/transl_elong_EF1B_N_euk; . InterPro IPR000449; UBA/Ts_N; . InterPro IPR000626; Ubiquitin-like; . InterPro IPR029071; Ubiquitin-rel_dom; . InterPro IPR015360; XPC-bd; . Pfam PF00627; UBA; 2; . Pfam PF00240; ubiquitin; 1; . Pfam PF09280; XPC-binding; 1; . PRINTS PR01839; RAD23PROTEIN; . SMART SM00727; STI1; 1; . SMART SM00165; UBA; 2; . SMART SM00213; UBQ; 1; . SUPFAM SSF101238; SSF101238; 1; . SUPFAM SSF46934; SSF46934; 2; . SUPFAM SSF54236; SSF54236; 1; . TIGRFAMs TIGR00601; rad23; 1; . PROSITE PS50030; UBA; 2; . PROSITE PS50053; UBIQUITIN_2; 1; . World-2DPAGE Repository (search AC)