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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0021]' for entry matching: P56399 World-2DPAGE Repository (0021):  P56399 P56399 General information about the entry View entry in simple text format Entry name UBP5_MOUSE Primary accession number P56399 integrated into World-2DPAGE Repository (0021) on  June 9, 2010 (release 1) 2D Annotations were last modified on June 20, 2011 (version 2) General Annotations were last modified on  November 30, 2011 (version 2) Name and origin of the protein Description RecName: Full=Ubiquitin carboxyl-terminal hydrolase 5; EC=3.4.19.12; AltName: Full=Deubiquitinating enzyme 5; AltName: Full=Isopeptidase T; AltName: Full=Ubiquitin thiolesterase 5; AltName: Full=Ubiquitin-specific-processing protease 5;. Gene name Name=Usp5 Synonyms=Isot Annotated species Mus musculus (Mouse) [TaxID: 10090] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus. References [1]   2D-PAGE GEL CHARACTERIZATION De Cegli R., Romito A., Iacobacci S., Mao L., Lauria M., Fedele A.O., Klose J., Borel C., Descombes P., Antonarakis S.E., Di Bernardo D., Banfi S., Ballabio A., Cobellis G. ''A mouse Embryonic Stem Cell Bank for inducible overexpression of human Chromosome 21 genes'' Genome Biol 11(6):R64 (2010) 2D PAGE maps for identified proteins How to interpret a protein RUNX1_DAY7 {Mouse embryonic stem cells overexpressing Runx1, Day 7} Mus musculus (Mouse) Tissue: Embryonic stem cell   map experimental info   RUNX1_DAY7 MAP LOCATIONS: SPOT 2303: pI=4.89; Mw=95700   [identification data] EXPRESSION: SPOT 2303: Protein ratio 48h/0h=3.99 [1]. IDENTIFICATION: SPOT 2303: Mascot Protein score=402. SeqCov=25%. Peptides identified=18 [1]. MAPPING (identification): SPOT 2303: Tandem mass spectrometry [1]. Copyright Data from Dr. Lei Mao, Institute of Human Genetics, Charite Universitaetsmedizin Berlin, Germany Cross-references UniProtKB/Swiss-Prot P56399; UBP5_MOUSE. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name UBP5_MOUSE Primary accession number P56399 Sequence was last modified on  July 15, 1998 (version 1) Annotations were last modified on  November 16, 2011 (version 92) Name and origin of the protein Description RecName: Full=Ubiquitin carboxyl-terminal hydrolase 5; EC=3.4.19.12; AltName: Full=Deubiquitinating enzyme 5; AltName: Full=Isopeptidase T; AltName: Full=Ubiquitin thiolesterase 5; AltName: Full=Ubiquitin-specific-processing protease 5; Gene name Name=Usp5 Synonyms=Isot Encoded on Name=Usp5; Synonyms=Isot Keywords Acetylation; Complete proteome; Disulfide bond; Hydrolase; Metal-binding; Phosphoprotein; Protease; Reference proteome; Repeat; Thiol protease; Ubl conjugation pathway; Zinc; Zinc-finger. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AC002397; AAC36015.1; -; Genomic_DNA EMBL BC066993; AAH66993.1; -; mRNA IPI IPI00113214; -; . RefSeq NP_038728.1; NM_013700.1; . UniGene Mm.3571; -; . ProteinModelPortal P56399; -; . SMR P56399; 1-858; . MINT MINT-220667; -; . STRING P56399; -; . MEROPS C19.001; -; . PhosphoSite P56399; -; . PRIDE P56399; -; . Ensembl ENSMUST00000047510; ENSMUSP00000041299; ENSMUSG00000038429; . GeneID 22225; -; . KEGG mmu:22225; -; . UCSC uc009dsa.1; mouse; . CTD 8078; -; . MGI MGI:1347343; Usp5; . eggNOG roNOG15340; -; . GeneTree ENSGT00390000000874; -; . HOGENOM HBG746888; -; . HOVERGEN HBG002833; -; . InParanoid P56399; -; . OMA VIYNDQK; -; . PhylomeDB P56399; -; . NextBio 302251; -; . ArrayExpress P56399; -; . Bgee P56399; -; . CleanEx MM_USP5; -; . Genevestigator P56399; -; . GermOnline ENSMUSG00000038429; Mus musculus; . GO GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW; . GO GO:0008242; F:omega peptidase activity; IEA:InterPro; . GO GO:0005515; F:protein binding; IPI:UniProtKB; . GO GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro; . GO GO:0008270; F:zinc ion binding; IEA:InterPro; . GO GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro; . InterPro IPR018200; Pept_C19ubi-hydrolase_C_CS; . InterPro IPR001394; Peptidase_C19; . InterPro IPR009060; UBA-like; . InterPro IPR000449; UBA/transl_elong_EF1B_N; . InterPro IPR015940; UBA/transl_elong_EF1B_N_euk; . InterPro IPR016652; Ubiquitinyl_hydrolase; . InterPro IPR013083; Znf_RING/FYVE/PHD; . InterPro IPR001607; Znf_UBP; . Gene3D G3DSA:3.30.40.10; Znf_RING/FYVE/PHD; 1; . KO K11836; -; . Pfam PF00627; UBA; 2; . Pfam PF00443; UCH; 1; . Pfam PF02148; zf-UBP; 1; . PIRSF PIRSF016308; UBP; 1; . SMART SM00165; UBA; 2; . SMART SM00290; ZnF_UBP; 1; . SUPFAM SSF46934; UBA_like; 1; . PROSITE PS50030; UBA; 2; . PROSITE PS00972; UCH_2_1; 1; . PROSITE PS00973; UCH_2_2; 1; . PROSITE PS50235; UCH_2_3; 1; . PROSITE PS50271; ZF_UBP; 1; . World-2DPAGE Repository (search AC)