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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0004]' for entry matching: P60901 World-2DPAGE Repository (0004):  P60901 P60901 General information about the entry View entry in simple text format Entry name PSA6_RAT Primary accession number P60901 integrated into World-2DPAGE Repository (0004) on  October 13, 2008 (release 1) 2D Annotations were last modified on May 18, 2011 (version 2) General Annotations were last modified on  December 22, 2011 (version 2) Name and origin of the protein Description RecName: Full=Proteasome subunit alpha type-6; EC=3.4.25.1; AltName: Full=Macropain iota chain; AltName: Full=Multicatalytic endopeptidase complex iota chain; AltName: Full=Proteasome iota chain;. Gene name Name=Psma6 Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009) 2D PAGE maps for identified proteins How to interpret a protein OB21DSUB {2-DE gel for Olfactory bulb proteome} Rattus norvegicus (Rat) Tissue: Olfactory bulb   map experimental info   OB21DSUB MAP LOCATIONS: SPOT 630: pI=6.29; Mw=27000   [identification data] MAPPING (identification): SPOT 630: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India Cross-references UniProtKB/Swiss-Prot P60901; PSA6_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_12 Entry name PSA6_RAT Primary accession number P60901 Secondary accession number(s) P34062 Sequence was last modified on  April 13, 2004 (version 1) Annotations were last modified on  November 16, 2011 (version 77) Name and origin of the protein Description RecName: Full=Proteasome subunit alpha type-6; EC=3.4.25.1; AltName: Full=Macropain iota chain; AltName: Full=Multicatalytic endopeptidase complex iota chain; AltName: Full=Proteasome iota chain; Gene name Name=Psma6 Encoded on Name=Psma6 Keywords Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Hydrolase; Isopeptide bond; Nucleus; Phosphoprotein; Protease; Proteasome; Reference proteome; Threonine protease; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL D10755; BAA01587.1; -; mRNA EMBL BC062232; AAH62232.1; -; mRNA IPI IPI00191501; -; . PIR JX0230; JX0230; . RefSeq NP_058979.1; NM_017283.2; . UniGene Rn.107278; -; . ProteinModelPortal P60901; -; . SMR P60901; 2-245; . IntAct P60901; 1; . STRING P60901; -; . MEROPS T01.971; -; . PhosphoSite P60901; -; . World-2DPAGE 0004:P60901; -; . PRIDE P60901; -; . Ensembl ENSRNOT00000009666; ENSRNOP00000009666; ENSRNOG00000007114; . GeneID 29673; -; . KEGG rno:29673; -; . UCSC NM_017283; rat; . CTD 5687; -; . RGD 61849; Psma6; . eggNOG roNOG06143; -; . GeneTree ENSGT00550000074807; -; . HOVERGEN HBG107363; -; . InParanoid P60901; -; . OMA GKDCAVV; -; . OrthoDB EOG4BP1CH; -; . PhylomeDB P60901; -; . NextBio 610003; -; . ArrayExpress P60901; -; . Genevestigator P60901; -; . GermOnline ENSRNOG00000007114; Rattus norvegicus; . GO GO:0016363; C:nuclear matrix; ISS:BHF-UCL; . GO GO:0005844; C:polysome; ISS:BHF-UCL; . GO GO:0019773; C:proteasome core complex; alpha-subunit complex; ISS:BHF-UCL GO GO:0030017; C:sarcomere; IDA:BHF-UCL; . GO GO:0003723; F:RNA binding; ISS:BHF-UCL; . GO GO:0004298; F:threonine-type endopeptidase activity; IEA:UniProtKB-KW; . GO GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISS:BHF-UCL; . GO GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro; . InterPro IPR000426; Proteasome_asu_CS; . InterPro IPR023332; Proteasome_suA-type; . InterPro IPR001353; Proteasome_sua/b; . KO K02730; -; . Pfam PF00227; Proteasome; 1; . Pfam PF10584; Proteasome_A_N; 1; . SMART SM00948; Proteasome_A_N; 1; . PROSITE PS00388; PROTEASOME_A_1; 1; . PROSITE PS51475; PROTEASOME_A_2; 1; . World-2DPAGE Repository (search AC)