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World-2DPAGE Repository
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SWISS-2DPAGE
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Searching in 'World-2DPAGE Repository [0004]' for entry
matching:
P84079
World-2DPAGE Repository
(0004):
P84079
P84079
General information about the entry
View entry in simple text format
Entry name
ARF1_RAT
Primary accession number
P84079
integrated into World-2DPAGE Repository (0004) on
October 13, 2008 (release 1)
2D Annotations were last modified on
May 18, 2011 (version 2)
General Annotations were last modified on
December 22, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=ADP-ribosylation factor 1;.
Gene name
Name=Arf1
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
MAPPING ON GEL
PubMed=19343716; DOI=
10.1002/pmic.200800664
; [
NCBI
,
EBI
,
Israel
,
Japan
]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein
OB21DSUB
{2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
map experimental info
OB21DSUB
MAP LOCATIONS:
SPOT 741
:
pI=5.91; Mw=18000
[identification data]
MAPPING (identification):
SPOT
741
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-Prot
P84079; ARF1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_12
Entry name
ARF1_RAT
Primary accession number
P84079
Secondary accession number(s)
P10947 P32889
Sequence was last modified on
January 23, 2007 (version 2)
Annotations were last modified on
November 16, 2011 (version 78)
Name and origin of the protein
Description
RecName: Full=ADP-ribosylation factor 1;
Gene name
Name=Arf1
Encoded on
Name=Arf1
Keywords
3D-structure
;
Complete proteome
;
Cytoplasm
;
ER-Golgi transport
;
Golgi apparatus
;
GTP-binding
;
Lipoprotein
;
Myristate
;
Nucleotide-binding
;
Phosphoprotein
;
Protein transport
;
Reference proteome
;
Transport
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
L12380; AAA40685.1
; -; mRNA
EMBL
BC061552; AAH61552.1
; -; mRNA
IPI
IPI00331953; -
; .
RefSeq
NP_071963.1; NM_022518.3
; .
UniGene
Rn.93735; -
; .
PDB
1RRF; X-ray
; 3.00 A; A=1-181
PDB
1RRG; X-ray
; 2.40 A; A/B=1-181
PDBsum
1RRF; -
; .
PDBsum
1RRG; -
; .
ProteinModelPortal
P84079; -
; .
SMR
P84079; 2-180
; .
IntAct
P84079; 1
; .
STRING
P84079; -
; .
PhosphoSite
P84079; -
; .
World-2DPAGE
0004:P84079; -
; .
PRIDE
P84079; -
; .
Ensembl
ENSRNOT00000040458; ENSRNOP00000041363
; ENSRNOG00000030591; .
GeneID
64310; -
; .
KEGG
rno:64310; -
; .
UCSC
NM_022518; rat
; .
CTD
375; -
; .
RGD
621270; Arf1
; .
eggNOG
maNOG14156; -
; .
GeneTree
ENSGT00570000078761; -
; .
HOVERGEN
HBG002073; -
; .
InParanoid
P84079; -
; .
OMA
NDRDRMR; -
; .
OrthoDB
EOG4PZJ7Q; -
; .
PhylomeDB
P84079; -
; .
NextBio
612958; -
; .
ArrayExpress
P84079; -
; .
Genevestigator
P84079; -
; .
GermOnline
ENSRNOG00000030591; Rattus norvegicus
; .
GO
GO:0005794; C:Golgi apparatus
; IEA:UniProtKB-SubCell; .
GO
GO:0048471; C:perinuclear region of cytoplasm
; IEA:UniProtKB-SubCell; .
GO
GO:0005525; F:GTP binding
; IEA:UniProtKB-KW; .
GO
GO:0015031; P:protein transport
; IEA:UniProtKB-KW; .
GO
GO:0007264; P:small GTPase mediated signal transduction
; IEA:InterPro; .
GO
GO:0016192; P:vesicle-mediated transport
; IEA:UniProtKB-KW; .
InterPro
IPR005225; Small_GTP-bd_dom
; .
InterPro
IPR024156; Small_GTPase_ARF
; .
InterPro
IPR006689; Small_GTPase_ARF/SAR
; .
KO
K07937; -
; .
PANTHER
PTHR11711; ARF/SAR
; 1; .
Pfam
PF00025; Arf
; 1; .
PRINTS
PR00328; SAR1GTPBP
; .
SMART
SM00177; ARF
; 1; .
TIGRFAMs
TIGR00231; Small_GTP
; 1; .
PROSITE
PS51417; ARF
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server