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Searching in 'World-2DPAGE Repository [0030]' for entry matching: PDIA1_RAT

World-2DPAGE Repository (0030):  PDIA1_RAT


General information about the entry
View entry in simple text format
Entry namePDIA1_RAT
Primary accession numberP04785
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Protein disulfide-isomerase; Short=PDI; EC=; AltName: Full=Cellular thyroid hormone-binding protein; AltName: Full=Prolyl 4-hydroxylase subunit beta; Flags: Precursor;.
Gene nameName=P4hb
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
  map experimental info

pI=5.64; Mw=67834  [identification data]
pI=4.71; Mw=66625  [identification data]
pI=4.74; Mw=66533  [identification data]

IDENTIFICATION: SPOT 846: Mascot protein score=82. Number of peptides=3 [1]
SPOT 860: Mascot protein score=283. Number of peptides=7 [1]; SPOT 872: Mascot protein score=484. Number of peptides=10 [1].
MAPPING (identification):
SPOT 846: Tandem mass spectrometry [1];
SPOT 860: Tandem mass spectrometry [1];
SPOT 872: Tandem mass spectrometry [1].

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
UniProtKB/Swiss-ProtP04785; PDIA1_RAT.
World-2DPAGE RepositoryP04785; PDIA1_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry namePDIA1_RAT
Primary accession numberP04785
Secondary accession number(s) P13700
Sequence was last modified on October 1, 1989 (version 2)
Annotations were last modified on November 16, 2011 (version 125)
Name and origin of the protein
DescriptionRecName: Full=Protein disulfide-isomerase; Short=PDI; EC=; AltName: Full=Cellular thyroid hormone-binding protein; AltName: Full=Prolyl 4-hydroxylase subunit beta; Flags: Precursor;
Gene nameName=P4hb
Encoded onName=P4hb; Synonyms=Pdia1
KeywordsCell membrane; Chaperone; Complete proteome; Direct protein sequencing; Disulfide bond; Endoplasmic reticulum; Isomerase; Membrane; Redox-active center; Reference proteome; Repeat; Signal.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLM21018; AAA40620.1; -; mRNA
EMBLBC061857; AAH61857.1; -; mRNA
EMBLX02918; CAA26675.1; -; mRNA
EMBLM21476; AAA40619.1; -; mRNA
IPIIPI00198887; -; .
PIRA24595; ISRTSS; .
PIRS68028; S68028; .
RefSeqNP_037130.1; NM_012998.1; .
UniGeneRn.4234; -; .
ProteinModelPortalP04785; -; .
SMRP04785; 20-359; 370-473; .
IntActP04785; 1; .
STRINGP04785; -; .
PhosphoSiteP04785; -; .
PRIDEP04785; -; .
EnsemblENSRNOT00000054958; ENSRNOP00000051841; ENSRNOG00000036689; .
GeneID25506; -; .
KEGGrno:25506; -; .
UCSCNM_012998; rat; .
CTD5034; -; .
RGD3244; P4hb; .
eggNOGroNOG08939; -; .
GeneTreeENSGT00590000082936; -; .
HOVERGENHBG005920; -; .
InParanoidP04785; -; .
OrthoDBEOG4JWVDB; -; .
PhylomeDBP04785; -; .
NextBio606925; -; .
GenevestigatorP04785; -; .
GermOnlineENSRNOG00000036689; Rattus norvegicus; .
GOGO:0005788; C:endoplasmic reticulum lumen; IEA:UniProtKB-SubCell; .
GOGO:0042470; C:melanosome; IEA:UniProtKB-SubCell; .
GOGO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell; .
GOGO:0009055; F:electron carrier activity; IEA:InterPro; .
GOGO:0003756; F:protein disulfide isomerase activity; IMP:RGD; .
GOGO:0015035; F:protein disulfide oxidoreductase activity; IEA:InterPro; .
GOGO:0046982; F:protein heterodimerization activity; IPI:RGD; .
GOGO:0045454; P:cell redox homeostasis; IEA:InterPro; .
GOGO:0006662; P:glycerol ether metabolic process; IEA:InterPro; .
InterProIPR005788; Disulphide_isomerase; .
InterProIPR005792; Prot_disulphide_isomerase; .
InterProIPR005746; Thioredoxin; .
InterProIPR012336; Thioredoxin-like_fold; .
InterProIPR017937; Thioredoxin_CS; .
InterProIPR013766; Thioredoxin_domain; .
Gene3DG3DSA:; Thioredoxin_fold; 3; .
KOK09580; -; .
PfamPF00085; Thioredoxin; 2; .
SUPFAMSSF52833; Thiordxn-like_fd; 4; .
TIGRFAMsTIGR01130; ER_PDI_fam; 1; .
TIGRFAMsTIGR01126; Pdi_dom; 2; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server