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Searching in 'World-2DPAGE Repository [0054]' for entry matching: Q01826




World-2DPAGE Repository (0054):  Q01826


Q01826


General information about the entry
View entry in simple text format
Entry nameSATB1_HUMAN
Primary accession numberQ01826
integrated into World-2DPAGE Repository (0054) on November 28, 2012 (release 1)
2D Annotations were last modified onNovember 28, 2012 (version 1)
General Annotations were last modified on October 23, 2014 (version 2)
Name and origin of the protein
DescriptionRecName: Full=DNA-binding protein SATB1; AltName: Full=Special AT-rich sequence-binding protein 1;.
Gene nameName=SATB1
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
DOI=10.1074/mcp.M112.022947;
Vernocchi S., Battello N., Schmitz S., Revets D., Billing A.M., Turner J.D., Muller C.P.
''Membrane glucocorticoid receptor activation induces proteomic changes aligning with classical glucocorticoid-effects''
Molecular & Cellular Proteomics 12(7):1764-1779 (2013)
2D PAGE maps for identified proteins
How to interpret a protein

HSAPIENS_CCRF-CEM_3-10 {CCRF-CEM cells stimulated with Cort-BSA (internal standard)}
Homo sapiens (Human)
HSAPIENS_CCRF-CEM_3-10
  map experimental info
 
HSAPIENS_CCRF-CEM_3-10

MAP LOCATIONS:
pI=6.09; Mw=85957  [identification data]

%COV: SPOT 404: 27 [1].
SCORE: SPOT 404: 394 [1].
SEARCH ENGINE: SPOT 404: Mascot [1].
MAPPING (identification):
SPOT 404: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Claude P. Muller, Centre de Recherche Public de la Sante / National Public Health Laboratory, Luxembourg
Cross-references
UniProtKB/Swiss-ProtQ01826; SATB1_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameSATB1_HUMAN
Primary accession numberQ01826
Secondary accession number(s) B3KXF1 C9JTR6 Q59EQ0
Sequence was last modified on October 1, 1993 (version 1)
Annotations were last modified on October 1, 2014 (version 143)
Name and origin of the protein
DescriptionRecName: Full=DNA-binding protein SATB1; AltName: Full=Special AT-rich sequence-binding protein 1;
Gene nameName=SATB1
Encoded onName=SATB1
Keywords3D-structure; Acetylation; Alternative splicing; Chromatin regulator; Chromosomal rearrangement; Complete proteome; DNA-binding; Homeobox; Host-virus interaction; Isopeptide bond; Nucleus; Phosphoprotein; Reference proteome; Repeat; Repressor; Transcription; Transcription regulation; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM97287; AAA60304.1; -; mRNA
EMBLAK127242; BAG54463.1; -; mRNA
EMBLAB209761; BAD92998.1; ALT_INIT; mRNA
EMBLAC139618; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLAC144521; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLCH471055; EAW64291.1; -; Genomic_DNA
EMBLBC001744; AAH01744.1; -; mRNA
CCDSCCDS2631.1; -. [Q01826-1]; .
CCDSCCDS56242.1; -. [Q01826-2]; .
PIRA43314; A43314; .
RefSeqNP_001124482.1; NM_001131010.2. [Q01826-1]; .
RefSeqNP_001182399.1; NM_001195470.1. [Q01826-2]; .
RefSeqNP_002962.1; NM_002971.4. [Q01826-1]; .
RefSeqXP_006713343.1; XM_006713280.1. [Q01826-1]; .
UniGeneHs.517717; -; .
PDB1YSE; NMR; -; A=353-490
PDB2L1P; NMR; -; A=179-250
PDB2O49; X-ray; 2.00 A; A=368-452
PDB2O4A; X-ray; 1.75 A; A=368-452
PDB3NZL; X-ray; 1.20 A; A=179-250
PDB3TUO; X-ray; 1.70 A; A/B/C/D=71-171
PDBsum1YSE; -; .
PDBsum2L1P; -; .
PDBsum2O49; -; .
PDBsum2O4A; -; .
PDBsum3NZL; -; .
PDBsum3TUO; -; .
ProteinModelPortalQ01826; -; .
SMRQ01826; 71-171; 179-250; 370-452
486-573646-704; .
BioGrid112211; 28; .
DIPDIP-48757N; -; .
IntActQ01826; 9; .
MINTMINT-1478608; -; .
STRING9606.ENSP00000341024; -; .
PhosphoSiteQ01826; -; .
DMDM417747; -; .
MaxQBQ01826; -; .
PaxDbQ01826; -; .
PRIDEQ01826; -; .
DNASU6304; -; .
EnsemblENST00000338745; ENSP00000341024; ENSG00000182568. [Q01826-1]; .
EnsemblENST00000417717; ENSP00000399518; ENSG00000182568. [Q01826-2]; .
EnsemblENST00000454909; ENSP00000399708; ENSG00000182568. [Q01826-1]; .
GeneID6304; -; .
KEGGhsa:6304; -; .
UCSCuc003cbh.3; human. [Q01826-1]; .
UCSCuc003cbi.3; human. [Q01826-2]; .
CTD6304; -; .
GeneCardsGC03M018364; -; .
HGNCHGNC:10541; SATB1; .
HPACAB023814; -; .
MIM602075; gene; .
neXtProtNX_Q01826; -; .
PharmGKBPA34951; -; .
eggNOGNOG313826; -; .
HOGENOMHOG000004805; -; .
HOVERGENHBG054240; -; .
OMASMNINAS; -; .
OrthoDBEOG7FBRH5; -; .
PhylomeDBQ01826; -; .
TreeFamTF332714; -; .
ReactomeREACT_107; Apoptotic cleavage of cellular proteins; .
ChiTaRSSATB1; human; .
EvolutionaryTraceQ01826; -; .
GeneWikiSATB1; -; .
GenomeRNAi6304; -; .
NextBio24475; -; .
PMAP-CutDBQ01826; -; .
PROPR:Q01826; -; .
ArrayExpressQ01826; -; .
BgeeQ01826; -; .
CleanExHS_SATB1; -; .
GenevestigatorQ01826; -; .
GOGO:0005720; C:nuclear heterochromatin; IEA:Ensembl; .
GOGO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell; .
GOGO:0005654; C:nucleoplasm; TAS:Reactome; .
GOGO:0005634; C:nucleus; IDA:UniProtKB; .
GOGO:0016605; C:PML body; IDA:UniProtKB; .
GOGO:0003682; F:chromatin binding; IEA:Ensembl; .
GOGO:0003690; F:double-stranded DNA binding; TAS:ProtInc; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0043565; F:sequence-specific DNA binding; IEA:InterPro; .
GOGO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:Ensembl; .
GOGO:0050798; P:activated T cell proliferation; IEA:Ensembl; .
GOGO:0006915; P:apoptotic process; TAS:Reactome; .
GOGO:0043367; P:CD4-positive; alpha-beta T cell differentiation; IEA:Ensembl
GOGO:0043374; P:CD8-positive; alpha-beta T cell differentiation; IEA:Ensembl
GOGO:0006921; P:cellular component disassembly involved in execution phase of apoptosis; TAS:Reactome; .
GOGO:0006325; P:chromatin organization; TAS:ProtInc; .
GOGO:0006338; P:chromatin remodeling; IEA:Ensembl; .
GOGO:0008544; P:epidermis development; IEA:Ensembl; .
GOGO:0016571; P:histone methylation; IEA:Ensembl; .
GOGO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:MGI; .
GOGO:0060004; P:reflex; IEA:Ensembl; .
GOGO:0006351; P:transcription; DNA-templated; IEA:UniProtKB-KW
GOGO:0016032; P:viral process; IEA:UniProtKB-KW; .
Gene3D1.10.10.60; -; 1; .
Gene3D1.10.260.40; -; 2; .
InterProIPR003350; Hmoeo_CUT; .
InterProIPR001356; Homeobox_dom; .
InterProIPR009057; Homeodomain-like; .
InterProIPR010982; Lambda_DNA-bd_dom; .
PfamPF02376; CUT; 2; .
PfamPF00046; Homeobox; 1; .
SMARTSM00389; HOX; 1; .
SUPFAMSSF46689; SSF46689; 1; .
SUPFAMSSF47413; SSF47413; 2; .
PROSITEPS51042; CUT; 2; .
PROSITEPS50071; HOMEOBOX_2; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server