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Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q3MID6_RAT




World-2DPAGE Repository (0030):  Q3MID6_RAT

Q3MID6_RAT


General information about the entry
View entry in simple text format
Entry nameQ3MID6_RAT
Primary accession numberQ3MID6
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Calumenin; SubName: Full=RCG28015, isoform CRA_a; SubName: Full=Uncharacterized protein;.
Gene nameName=Calu
Synonyms=MGC124555
ORFNames=rCG_28015
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info 		 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=4.28; Mw=56668  [identification data]
pI=4.25; Mw=56590  [identification data]
pI=4.28; Mw=58017  [identification data]
pI=4.26; Mw=57777  [identification data]

IDENTIFICATION: SPOT 3000: Mascot protein score=87. Number of peptides=2 [1]
SPOT 3001: Mascot protein score=52. Number of peptides=2 [1]; SPOT 3022: Mascot protein score=76. Number of peptides=2 [1]; SPOT 3023: Mascot protein score=45. Number of peptides=2 [1].
MAPPING (identification):
SPOT 3000: Tandem mass spectrometry [1];
SPOT 3001: Tandem mass spectrometry [1];
SPOT 3022: Tandem mass spectrometry [1];
SPOT 3023: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/TrEMBLQ3MID6; Q3MID6_RAT.
World-2DPAGE RepositoryQ3MID6; Q3MID6_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameQ3MID6_RAT
Primary accession numberQ3MID6
Sequence was last modified on October 25, 2005 (version 1)
Annotations were last modified on November 16, 2011 (version 54)
Name and origin of the protein
DescriptionSubName: Full=Calumenin; SubName: Full=RCG28015, isoform CRA_a; SubName: Full=Uncharacterized protein;
Gene nameName=Calu
Synonyms=MGC124555
ORFNames=rCG_28015
Encoded onName=Calu; Synonyms=MGC124555; ORFNames=rCG_28015
KeywordsCalcium; Complete proteome; Reference proteome.
Cross-references
EMBLAC095491; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLAC110980; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLBC101908; AAI01909.1; -; mRNA
EMBLCH473959; EDM15212.1; -; Genomic_DNA
EMBLCH473959; EDM15213.1; -; Genomic_DNA
IPIIPI00554194; -; .
RefSeqNP_001029070.1; NM_001033898.1; .
RefSeqNP_071980.2; NM_022535.2; .
UniGeneRn.1841; -; .
ProteinModelPortalQ3MID6; -; .
STRINGQ3MID6; -; .
PRIDEQ3MID6; -; .
EnsemblENSRNOT00000008972; ENSRNOP00000008972; ENSRNOG00000006197; .
GeneID64366; -; .
KEGGrno:64366; -; .
UCSCNM_001033898; rat; .
CTD813; -; .
RGD620383; Calu; .
GeneTreeENSGT00550000074546; -; .
HOVERGENHBG002834; -; .
InParanoidQ3MID6; -; .
OMAQYTQRRY; -; .
NextBio613090; -; .
ArrayExpressQ3MID6; -; .
GenevestigatorQ3MID6; -; .
GOGO:0005509; F:calcium ion binding; IEA:InterPro; .
InterProIPR011992; EF-hand-like_dom; .
InterProIPR018247; EF_Hand_1_Ca_BS; .
InterProIPR018249; EF_HAND_2; .
InterProIPR002048; EF_hand_Ca-bd; .
Gene3DG3DSA:1.10.238.10; EF-Hand_type; 2; .
SMARTSM00054; EFh; 5; .
PROSITEPS00018; EF_HAND_1; 4; .
PROSITEPS50222; EF_HAND_2; 6; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server