World-2DPAGE Home
Home  |  Contact
Due to maintenance work, this service and ftp://ftp.expasy.org will be unavailable from Tuesday August 23rd 18:00 until Wednesday August 24th 08:00 CEST. Apologies for the inconvenience.


World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Databases

use 'Ctrl' to select several
databases


Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
     
Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q4KLJ1




World-2DPAGE Repository (0030):  Q4KLJ1


Q4KLJ1


General information about the entry
View entry in simple text format
Entry nameQ4KLJ1_RAT
Primary accession numberQ4KLJ1
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=RCG61762, isoform CRA_a; SubName: Full=Splicing factor, arginine/serine-rich 7;.
Gene nameName=Sfrs7
ORFNames=rCG_61762
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info
 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=5.00; Mw=39006  [identification data]
pI=4.94; Mw=37889  [identification data]
pI=4.99; Mw=35799  [identification data]

IDENTIFICATION: SPOT 1729: Mascot protein score=57. Number of peptides=2 [1]
SPOT 1777: Mascot protein score=61. Number of peptides=4 [1]; SPOT 1839: Mascot protein score=84. Number of peptides=3 [1].
MAPPING (identification):
SPOT 1729: Tandem mass spectrometry [1];
SPOT 1777: Tandem mass spectrometry [1];
SPOT 1839: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/TrEMBLQ4KLJ1; Q4KLJ1_RAT.
World-2DPAGE RepositoryQ4KLJ1; Q4KLJ1_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameQ4KLJ1_RAT
Primary accession numberQ4KLJ1
Sequence was last modified on August 2, 2005 (version 1)
Annotations were last modified on July 27, 2011 (version 56)
Name and origin of the protein
DescriptionSubName: Full=RCG61762, isoform CRA_a; SubName: Full=Splicing factor, arginine/serine-rich 7;
Gene nameName=Sfrs7
ORFNames=rCG_61762
Encoded onName=Sfrs7; ORFNames=rCG_61762
KeywordsMetal-binding; Zinc; Zinc-finger.
Cross-references
EMBLBC099175; AAH99175.1; -; mRNA
EMBLCH473947; EDM02771.1; -; Genomic_DNA
EMBLCH473947; EDM02772.1; -; Genomic_DNA
IPIIPI00969773; -; .
UniGeneRn.218757; -; .
ProteinModelPortalQ4KLJ1; -; .
SMRQ4KLJ1; 12-98; .
UCSCNM_001039035; rat; .
RGD1307425; Sfrs7; .
eggNOGmaNOG20034; -; .
HOVERGENHBG107480; -; .
NextBio680884; -; .
GenevestigatorQ4KLJ1; -; .
GOGO:0003676; F:nucleic acid binding; IEA:InterPro; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0008270; F:zinc ion binding; IEA:InterPro; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
InterProIPR013084; Znf_CCH_retrovir; .
InterProIPR001878; Znf_CCHC; .
Gene3DG3DSA:3.30.70.330; a_b_plait_nuc_bd; 1; .
Gene3DG3DSA:4.10.60.10; Znf_CCH_retrovir; 1; .
PfamPF00076; RRM_1; 1; .
SMARTSM00360; RRM; 1; .
SMARTSM00343; ZnF_C2HC; 1; .
PROSITEPS50102; RRM; 1; .
PROSITEPS50158; ZF_CCHC; 1; .



World-2DPAGE Repository image

World-2DPAGE Repository (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server