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Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q4KM71




World-2DPAGE Repository (0030):  Q4KM71


Q4KM71


General information about the entry
View entry in simple text format
Entry nameQ4KM71_RAT
Primary accession numberQ4KM71
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Splicing factor proline/glutamine rich (Polypyrimidine tract binding protein associated);.
Gene nameName=Sfpq
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info
 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=6.72; Mw=63038  [identification data]

IDENTIFICATION: SPOT 990: Mascot protein score=95. Number of peptides=3 [1].
MAPPING (identification):
SPOT 990: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/TrEMBLQ4KM71; Q4KM71_RAT.
World-2DPAGE RepositoryQ4KM71; Q4KM71_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameQ4KM71_RAT
Primary accession numberQ4KM71
Sequence was last modified on August 2, 2005 (version 1)
Annotations were last modified on November 16, 2011 (version 55)
Name and origin of the protein
DescriptionSubName: Full=Splicing factor proline/glutamine rich (Polypyrimidine tract binding protein associated);
Gene nameName=Sfpq
Encoded onName=Sfpq
KeywordsName=Sfpq.
Cross-references
EMBLBC098731; AAH98731.1; -; mRNA
IPIIPI00627068; -; .
RefSeqNP_001020442.1; NM_001025271.1; .
UniGeneRn.54645; -; .
ProteinModelPortalQ4KM71; -; .
SMRQ4KM71; 282-366; .
STRINGQ4KM71; -; .
PhosphoSiteQ4KM71; -; .
PRIDEQ4KM71; -; .
GeneID252855; -; .
KEGGrno:252855; -; .
CTD6421; -; .
RGD727923; Sfpq; .
eggNOGroNOG07644; -; .
GeneTreeENSGT00390000005004; -; .
HOVERGENHBG009801; -; .
InParanoidQ4KM71; -; .
OrthoDBEOG4RNB8S; -; .
NextBio623920; -; .
ArrayExpressQ4KM71; -; .
GenevestigatorQ4KM71; -; .
GOGO:0003676; F:nucleic acid binding; IEA:InterPro; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0005515; F:protein binding; IPI:BHF-UCL; .
InterProIPR012975; NOPS; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
Gene3DG3DSA:3.30.70.330; a_b_plait_nuc_bd; 2; .
KOK13219; -; .
PfamPF08075; NOPS; 1; .
PfamPF00076; RRM_1; 2; .
SMARTSM00360; RRM; 2; .
PROSITEPS50102; RRM; 2; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server