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World-2DPAGE Repository
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SWISS-2DPAGE
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Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
Q5XIE6
World-2DPAGE Repository
(0022):
Q5XIE6
Q5XIE6
General information about the entry
View entry in simple text format
Entry name
HIBCH_RAT
Primary accession number
Q5XIE6
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; EC=3.1.2.4; AltName: Full=3-hydroxyisobutyryl-coenzyme A hydrolase; Short=HIB-CoA hydrolase; Short=HIBYL-CoA-H; Flags: Precursor;.
Gene name
Name=Hibch
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 782
:
pI=8.64; Mw=43282
[identification data]
IDENTIFICATION:
SPOT 782: SeqCov=30.6%. Peptides MS=9/20. Mascot PMF Score=68 [
1
].
PEPTIDE EVIDENCE:
SPOT 782: 190-LGYFLALTGFR-200 (27) / 267-INSCFSANTVEQILENLR-284 (99) [
1
].
MAPPING (identification):
SPOT
782
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
Q5XIE6; HIBCH_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
HIBCH_RAT
Primary accession number
Q5XIE6
Sequence was last modified on
May 1, 2007 (version 2)
Annotations were last modified on
November 16, 2011 (version 55)
Name and origin of the protein
Description
RecName: Full=3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; EC=3.1.2.4; AltName: Full=3-hydroxyisobutyryl-coenzyme A hydrolase; Short=HIB-CoA hydrolase; Short=HIBYL-CoA-H; Flags: Precursor;
Gene name
Name=Hibch
Encoded on
Name=Hibch
Keywords
Acetylation
;
Alternative splicing
;
Branched-chain amino acid catabolism
;
Complete proteome
;
Direct protein sequencing
;
Hydrolase
;
Mitochondrion
;
Reference proteome
;
Transit peptide
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
AABR03068835; -
; NOT_ANNOTATED_CDS; Genomic_DNA
EMBL
AABR03067918; -
; NOT_ANNOTATED_CDS; Genomic_DNA
EMBL
BC083737; AAH83737.1
; -; mRNA
IPI
IPI00357893; -
; .
IPI
IPI00558635; -
; .
RefSeq
NP_001013130.1; NM_001013112.1
; .
UniGene
Rn.8745; -
; .
HSSP
P14604; 2DUB
; .
ProteinModelPortal
Q5XIE6; -
; .
SMR
Q5XIE6; 36-385
; .
STRING
Q5XIE6; -
; .
PRIDE
Q5XIE6; -
; .
Ensembl
ENSRNOT00000029677; ENSRNOP00000032041
; ENSRNOG00000028557; .
Ensembl
ENSRNOT00000040650; ENSRNOP00000046370
; ENSRNOG00000028557; .
GeneID
301384; -
; .
KEGG
rno:301384; -
; .
NMPDR
fig|10116.3.peg.29996; -
; .
UCSC
NM_001013112; rat
; .
CTD
26275; -
; .
RGD
1308392; Hibch
; .
eggNOG
roNOG04677; -
; .
GeneTree
ENSGT00570000079226; -
; .
HOVERGEN
HBG054809; -
; .
InParanoid
Q5XIE6; -
; .
OrthoDB
EOG4G7BZM; -
; .
PhylomeDB
Q5XIE6; -
; .
BioCyc
MetaCyc:MONOMER-11699; -
; .
NextBio
648666; -
; .
ArrayExpress
Q5XIE6; -
; .
Genevestigator
Q5XIE6; -
; .
GO
GO:0005739; C:mitochondrion
; IEA:UniProtKB-SubCell; .
GO
GO:0003860; F:3-hydroxyisobutyryl-CoA hydrolase activity
; IEA:EC; .
GO
GO:0009083; P:branched chain family amino acid catabolic process
; IEA:UniProtKB-KW; .
InterPro
IPR001753; Crotonase_core
; .
KO
K05605; -
; .
Pfam
PF00378; ECH
; 1; .
PROSITE
PS00166; ENOYL_COA_HYDRATASE
; FALSE_NEG; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
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