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Searching in 'World-2DPAGE Repository [0019]' for entry matching: Q62952




World-2DPAGE Repository (0019):  Q62952


Q62952


General information about the entry
View entry in simple text format
Entry nameDPYL3_RAT
Primary accession numberQ62952
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Dihydropyrimidinase-related protein 3; Short=DRP-3; AltName: Full=Collapsin response mediator protein 4; Short=CRMP-4; AltName: Full=TOAD-64/Ulip/CRMP; AltName: Full=TUC-4b;.
Gene nameName=Dpysl3
Synonyms=Crmp4
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1111/j.1471-4159.2010.06719.x;
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
HIPP_SYNAP
  map experimental info
 
HIPP_SYNAP

MAP LOCATIONS:
pI=6.04; Mw=62327  [identification data]

IDENTIFICATION: SPOT 376: Peptides number=2. SeqCov=4.6%. MOWSE score=2.41E+2 [1].
MAPPING (identification):
SPOT 376: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Willard Freeman, Penn State College of Medicine, USA
Cross-references
UniProtKB/Swiss-ProtQ62952; DPYL3_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameDPYL3_RAT
Primary accession numberQ62952
Secondary accession number(s) Q8K4H3 Q91XM8
Sequence was last modified on December 6, 2005 (version 2)
Annotations were last modified on November 16, 2011 (version 95)
Name and origin of the protein
DescriptionRecName: Full=Dihydropyrimidinase-related protein 3; Short=DRP-3; AltName: Full=Collapsin response mediator protein 4; Short=CRMP-4; AltName: Full=TOAD-64/Ulip/CRMP; AltName: Full=TUC-4b;
Gene nameName=Dpysl3
Synonyms=Crmp4
Encoded onName=Dpysl3; Synonyms=Crmp4
KeywordsAlternative splicing; Cell projection; Complete proteome; Cytoplasm; Direct protein sequencing; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAF398465; AAM73758.1; -; mRNA
EMBLAF389425; AAK64497.1; -; mRNA
EMBLU52104; AAB03282.1; -; mRNA
IPIIPI00203250; -; .
IPIIPI00556970; -; .
RefSeqNP_037066.1; NM_012934.1; .
UniGeneRn.93365; -; .
ProteinModelPortalQ62952; -; .
SMRQ62952; 15-489; .
IntActQ62952; 1; .
MINTMINT-4598091; -; .
STRINGQ62952; -; .
MEROPSM38.976; -; .
PhosphoSiteQ62952; -; .
World-2DPAGE0004:Q62952; -; .
PRIDEQ62952; -; .
EnsemblENSRNOT00000025880; ENSRNOP00000025880; ENSRNOG00000018992; .
EnsemblENSRNOT00000067482; ENSRNOP00000062124; ENSRNOG00000018992; .
GeneID25418; -; .
KEGGrno:25418; -; .
CTD1809; -; .
RGD2410; Dpysl3; .
eggNOGmaNOG10678; -; .
GeneTreeENSGT00550000074371; -; .
HOVERGENHBG000806; -; .
InParanoidQ62952; -; .
OMAKMADLHA; -; .
PhylomeDBQ62952; -; .
NextBio606571; -; .
ArrayExpressQ62952; -; .
GenevestigatorQ62952; -; .
GermOnlineENSRNOG00000018992; Rattus norvegicus; .
GOGO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; .
GOGO:0005615; C:extracellular space; IDA:RGD; .
GOGO:0030426; C:growth cone; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0035374; F:chondroitin sulfate binding; IDA:RGD; .
GOGO:0016812; F:hydrolase activity; acting on carbon-nitrogen (but not peptide) bonds; in cyclic amides
IEA:InterPro.
GOGO:0017124; F:SH3 domain binding; IDA:RGD; .
GOGO:0048666; P:neuron development; IEP:RGD; .
GOGO:0010976; P:positive regulation of neuron projection development; IDA:RGD; .
GOGO:0006208; P:pyrimidine base catabolic process; IEA:InterPro; .
InterProIPR006680; Amidohydro_1; .
InterProIPR011778; Hydantoinase/dihydroPyrase; .
InterProIPR011059; Metal-dep_hydrolase_composite; .
PfamPF01979; Amidohydro_1; 1; .
SUPFAMSSF51338; Metalo_hydrolase; 1; .
TIGRFAMsTIGR02033; D-hydantoinase; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server