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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
Q63797
World-2DPAGE Repository
(0022):
Q63797
Q63797
General information about the entry
View entry in simple text format
Entry name
PSME1_RAT
Primary accession number
Q63797
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Proteasome activator complex subunit 1; AltName: Full=11S regulator complex subunit alpha; Short=REG-alpha; AltName: Full=Activator of multicatalytic protease subunit 1; AltName: Full=Proteasome activator 28 subunit alpha; Short=PA28a; Short=PA28alpha;.
Gene name
Name=Psme1
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 133
:
pI=5.77; Mw=28730
[identification data]
SPOT 173
:
pI=5.77; Mw=28730
[identification data]
IDENTIFICATION:
SPOT 133: SeqCov=31.7%. Peptides MS=8/20. Mascot PMF Score=60 [
1
]
SPOT 173: SeqCov=29.7%. Peptides MS=8/20. Mascot PMF Score=58 [
1
].
PEPTIDE EVIDENCE:
SPOT 133: 177-YFSER-181 (18) / 110-IVVLLQR-116 (33) / 199-QLVHELDEAEYQEIR-213 (71) [
1
]
SPOT 173: 177-YFSER-181 (22) / 110-IVVLLQR-116 (22) / 199-QLVHELDEAEYQEIR-213 (73) [
1
].
MAPPING (identification):
SPOT
133
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
];
SPOT
173
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
Q63797; PSME1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
PSME1_RAT
Primary accession number
Q63797
Sequence was last modified on
November 1, 1996 (version 1)
Annotations were last modified on
September 21, 2011 (version 74)
Name and origin of the protein
Description
RecName: Full=Proteasome activator complex subunit 1; AltName: Full=11S regulator complex subunit alpha; Short=REG-alpha; AltName: Full=Activator of multicatalytic protease subunit 1; AltName: Full=Proteasome activator 28 subunit alpha; Short=PA28a; Short=PA28alpha;
Gene name
Name=Psme1
Encoded on
Name=Psme1
Keywords
Complete proteome
;
Proteasome
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
D45249; BAA08206.1
; -; mRNA
IPI
IPI00555312; -
; .
UniGene
Rn.2742; -
; .
ProteinModelPortal
Q63797; -
; .
SMR
Q63797; 4-63
; 104-242; .
STRING
Q63797; -
; .
PRIDE
Q63797; -
; .
UCSC
NM_017264; rat
; .
RGD
3429; Psme1
; .
eggNOG
roNOG15514; -
; .
HOVERGEN
HBG053745; -
; .
InParanoid
Q63797; -
; .
OrthoDB
EOG42V8H5; -
; .
ArrayExpress
Q63797; -
; .
Genevestigator
Q63797; -
; .
GermOnline
ENSRNOG00000019041; Rattus norvegicus
; .
GO
GO:0008537; C:proteasome activator complex
; IEA:InterPro; .
InterPro
IPR003185; Proteasome_activ_REG_asu
; .
InterPro
IPR009077; Proteasome_activ_REG_asu/bsu
; .
InterPro
IPR003186; Proteasome_activ_REG_bsu
; .
Gene3D
G3DSA:1.20.5.120; PA28_alpha-like
; 1; .
Gene3D
G3DSA:1.20.120.180; PA28_beta
; 1; .
PANTHER
PTHR10660; Proteasome_activ_REG_asu/bsu
; 1; .
Pfam
PF02251; PA28_alpha
; 1; .
Pfam
PF02252; PA28_beta
; 1; .
SUPFAM
SSF47216; Prot_act_regA
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
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Make2D-DB II
package (
ver. 3.10.2
) from the
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