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Searching in 'World-2DPAGE Repository [0022]' for entry matching: Q641Z6




World-2DPAGE Repository (0022):  Q641Z6

Q641Z6


General information about the entry
View entry in simple text format
Entry nameEHD1_RAT
Primary accession numberQ641Z6
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=EH domain-containing protein 1;.
Gene nameName=Ehd1
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart
HCR_LCR_HEART
  map experimental info 		 
HCR_LCR_HEART

MAP LOCATIONS:
pI=6.35; Mw=60622  [identification data]
pI=6.35; Mw=60622  [identification data]

IDENTIFICATION: SPOT 25: SeqCov=21.7%. Peptides MS=9/20. Mascot PMF Score=62 [1]
SPOT 50: SeqCov=26.2%. Peptides MS=13/20. Mascot PMF Score=115 [1].
PEPTIDE EVIDENCE: SPOT 25: 168-GYDFAAVLEWFAER-181 (67) / 252-VYIGSFWSHPLLIPDNR-268 (68) [1]
SPOT 50: 168-GYDFAAVLEWFAER-181 (99) / 252-VYIGSFWSHPLLIPDNR-268 (50) [1].
MAPPING (identification):
SPOT 25: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 50: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-ProtQ641Z6; EHD1_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameEHD1_RAT
Primary accession numberQ641Z6
Secondary accession number(s) B1H289
Sequence was last modified on October 25, 2004 (version 1)
Annotations were last modified on November 16, 2011 (version 66)
Name and origin of the protein
DescriptionRecName: Full=EH domain-containing protein 1;
Gene nameName=Ehd1
Encoded onName=Ehd1
KeywordsATP-binding; Calcium; Cell membrane; Coiled coil; Complete proteome; Endosome; Membrane; Nucleotide-binding; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLBC082030; AAH82030.1; -; mRNA
EMBLBC160908; AAI60908.1; ALT_INIT; mRNA
IPIIPI00360340; -; .
RefSeqNP_001011939.1; NM_001011939.2; .
UniGeneRn.8141; -; .
HSSPP42566; 1EH2; .
ProteinModelPortalQ641Z6; -; .
SMRQ641Z6; 19-534; .
IntActQ641Z6; 2; .
STRINGQ641Z6; -; .
PRIDEQ641Z6; -; .
EnsemblENSRNOT00000054830; ENSRNOP00000051714; ENSRNOG00000043503; .
GeneID293692; -; .
KEGGrno:293692; -; .
UCSCBC082030; rat; .
CTD10938; -; .
RGD1309017; Ehd1; .
eggNOGroNOG06723; -; .
GeneTreeENSGT00600000084243; -; .
HOVERGENHBG018183; -; .
OMAQAYIISS; -; .
NextBio636762; -; .
ArrayExpressQ641Z6; -; .
GenevestigatorQ641Z6; -; .
GOGO:0031901; C:early endosome membrane; ISS:UniProtKB; .
GOGO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell; .
GOGO:0055038; C:recycling endosome membrane; ISS:UniProtKB; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0005509; F:calcium ion binding; IEA:InterPro; .
GOGO:0005525; F:GTP binding; IEA:InterPro; .
GOGO:0003924; F:GTPase activity; IEA:InterPro; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0032456; P:endocytic recycling; ISS:UniProtKB; .
GOGO:0006886; P:intracellular protein transport; ISS:UniProtKB; .
InterProIPR001401; Dynamin_GTPase; .
InterProIPR011992; EF-hand-like_dom; .
InterProIPR018247; EF_Hand_1_Ca_BS; .
InterProIPR018249; EF_HAND_2; .
InterProIPR000261; EPS15_homology; .
Gene3DG3DSA:1.10.238.10; EF-Hand_type; 1; .
KOK12483; -; .
PfamPF00350; Dynamin_N; 1; .
SMARTSM00027; EH; 1; .
PROSITEPS00018; EF_HAND_1; 1; .
PROSITEPS50222; EF_HAND_2; 1; .
PROSITEPS50031; EH; 1; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server