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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
Q641Z6
World-2DPAGE Repository
(0022):
Q641Z6
Q641Z6
General information about the entry
View entry in simple text format
Entry name
EHD1_RAT
Primary accession number
Q641Z6
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=EH domain-containing protein 1;.
Gene name
Name=Ehd1
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 25
:
pI=6.35; Mw=60622
[identification data]
SPOT 50
:
pI=6.35; Mw=60622
[identification data]
IDENTIFICATION:
SPOT 25: SeqCov=21.7%. Peptides MS=9/20. Mascot PMF Score=62 [
1
]
SPOT 50: SeqCov=26.2%. Peptides MS=13/20. Mascot PMF Score=115 [
1
].
PEPTIDE EVIDENCE:
SPOT 25: 168-GYDFAAVLEWFAER-181 (67) / 252-VYIGSFWSHPLLIPDNR-268 (68) [
1
]
SPOT 50: 168-GYDFAAVLEWFAER-181 (99) / 252-VYIGSFWSHPLLIPDNR-268 (50) [
1
].
MAPPING (identification):
SPOT
25
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
];
SPOT
50
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
Q641Z6; EHD1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
EHD1_RAT
Primary accession number
Q641Z6
Secondary accession number(s)
B1H289
Sequence was last modified on
October 25, 2004 (version 1)
Annotations were last modified on
November 16, 2011 (version 66)
Name and origin of the protein
Description
RecName: Full=EH domain-containing protein 1;
Gene name
Name=Ehd1
Encoded on
Name=Ehd1
Keywords
ATP-binding
;
Calcium
;
Cell membrane
;
Coiled coil
;
Complete proteome
;
Endosome
;
Membrane
;
Nucleotide-binding
;
Phosphoprotein
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
BC082030; AAH82030.1
; -; mRNA
EMBL
BC160908; AAI60908.1
; ALT_INIT; mRNA
IPI
IPI00360340; -
; .
RefSeq
NP_001011939.1; NM_001011939.2
; .
UniGene
Rn.8141; -
; .
HSSP
P42566; 1EH2
; .
ProteinModelPortal
Q641Z6; -
; .
SMR
Q641Z6; 19-534
; .
IntAct
Q641Z6; 2
; .
STRING
Q641Z6; -
; .
PRIDE
Q641Z6; -
; .
Ensembl
ENSRNOT00000054830; ENSRNOP00000051714
; ENSRNOG00000043503; .
GeneID
293692; -
; .
KEGG
rno:293692; -
; .
UCSC
BC082030; rat
; .
CTD
10938; -
; .
RGD
1309017; Ehd1
; .
eggNOG
roNOG06723; -
; .
GeneTree
ENSGT00600000084243; -
; .
HOVERGEN
HBG018183; -
; .
OMA
QAYIISS; -
; .
NextBio
636762; -
; .
ArrayExpress
Q641Z6; -
; .
Genevestigator
Q641Z6; -
; .
GO
GO:0031901; C:early endosome membrane
; ISS:UniProtKB; .
GO
GO:0005886; C:plasma membrane
; IEA:UniProtKB-SubCell; .
GO
GO:0055038; C:recycling endosome membrane
; ISS:UniProtKB; .
GO
GO:0005524; F:ATP binding
; IEA:UniProtKB-KW; .
GO
GO:0005509; F:calcium ion binding
; IEA:InterPro; .
GO
GO:0005525; F:GTP binding
; IEA:InterPro; .
GO
GO:0003924; F:GTPase activity
; IEA:InterPro; .
GO
GO:0005515; F:protein binding
; IPI:IntAct; .
GO
GO:0032456; P:endocytic recycling
; ISS:UniProtKB; .
GO
GO:0006886; P:intracellular protein transport
; ISS:UniProtKB; .
InterPro
IPR001401; Dynamin_GTPase
; .
InterPro
IPR011992; EF-hand-like_dom
; .
InterPro
IPR018247; EF_Hand_1_Ca_BS
; .
InterPro
IPR018249; EF_HAND_2
; .
InterPro
IPR000261; EPS15_homology
; .
Gene3D
G3DSA:1.10.238.10; EF-Hand_type
; 1; .
KO
K12483; -
; .
Pfam
PF00350; Dynamin_N
; 1; .
SMART
SM00027; EH
; 1; .
PROSITE
PS00018; EF_HAND_1
; 1; .
PROSITE
PS50222; EF_HAND_2
; 1; .
PROSITE
PS50031; EH
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
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