resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained.

World-2DPAGE Repository no longer accepts submissions.

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]


use 'Ctrl' to select several

Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0019]' for entry matching: Q6P6W6_RAT

World-2DPAGE Repository (0019):  Q6P6W6_RAT


General information about the entry
View entry in simple text format
Entry nameQ6P6W6_RAT
Primary accession numberQ6P6W6
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionSubName: Full=NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 10; SubName: Full=RCG55630, isoform CRA_c;.
Gene nameName=Ndufa10
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
  map experimental info

pI=5.44; Mw=31700  [identification data]
pI=5.44; Mw=31700  [identification data]

IDENTIFICATION: SPOT 603: Peptides number=31. SeqCov=83.9%. MOWSE score=6.67E+23 [1]
SPOT 638: Peptides number=4. SeqCov=28.8%. MOWSE score=3.20E+4 [1].
MAPPING (identification):
SPOT 603: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 638: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Willard Freeman, Penn State College of Medicine, USA

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_12
Entry nameQ6P6W6_RAT
Primary accession numberQ6P6W6
Sequence was last modified on July 5, 2004 (version 1)
Annotations were last modified on November 16, 2011 (version 49)
Name and origin of the protein
DescriptionSubName: Full=NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 10; SubName: Full=RCG55630, isoform CRA_c;
Gene nameName=Ndufa10
Encoded onName=Ndufa10; ORFNames=rCG_55630
EMBLBC061985; AAH61985.1; -; mRNA
EMBLCH473997; EDL91996.1; -; Genomic_DNA
IPIIPI00561513; -; .
RefSeqNP_955789.2; NM_199495.2; .
UniGeneRn.169414; -; .
ProteinModelPortalQ6P6W6; -; .
IntActQ6P6W6; 1; .
STRINGQ6P6W6; -; .
PRIDEQ6P6W6; -; .
GeneID678759; -; .
KEGGrno:678759; -; .
UCSCNM_199495; rat; .
CTD4705; -; .
RGD727968; Ndufa10; .
GeneTreeENSGT00390000016151; -; .
HOVERGENHBG002308; -; .
InParanoidQ6P6W6; -; .
PhylomeDBQ6P6W6; -; .
ArrayExpressQ6P6W6; -; .
GenevestigatorQ6P6W6; -; .
GOGO:0005524; F:ATP binding; IEA:InterPro; .
GOGO:0016773; F:phosphotransferase activity; alcohol group as acceptor; IEA:InterPro
GOGO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro; .
InterProIPR002624; Deoxynucleoside_kinase; .
InterProIPR015828; NADH_UbQ_OxRdtase_42KD_su; .
KOK03954; -; .
PANTHERPTHR10513; dNK; 1; .
PANTHERPTHR10513:SF2; PTHR10513:SF2; 1; .
PfamPF01712; dNK; 1; .
PIRSFPIRSF000543; NADH_UQ_42KD; 1; .

World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server