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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0003]' for entry matching: Q94C61 World-2DPAGE Repository (0003):  Q94C61 Q94C61 General information about the entry View entry in simple text format Entry name Q94C61_ARATH Primary accession number Q94C61 integrated into World-2DPAGE Repository (0003) on  October 14, 2008 (release 1) 2D Annotations were last modified on May 18, 2011 (version 2) General Annotations were last modified on  November 15, 2011 (version 2) Name and origin of the protein Description SubName: Full=Putative chromatin remodelling complex ATPase chain ISWI;. Gene name Name=At5g18620 Annotated species Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. References [1]   MAPPING ON GEL PubMed=18656559; DOI=10.1016/j.jprot.2008.06.012; [NCBI, EBI, Israel, Japan] Maldonado A.M., Echevarria-Zomeno S., Jean-Baptiste S., Hernandez M., Jorrin-Novo J.V. ''Evaluation of three different protocols of protein extraction for Arabidopsis thaliana leaf proteome analysis by two-dimensional electrophoresis'' J. Proteomics 71(4):461-472 (2008) 2D PAGE maps for identified proteins How to interpret a protein TCA-ACETONE-PHENOL_3 {TCA-Acetone-Phenol 3} Arabidopsis thaliana (Mouse-ear cress) Tissue: Leaf   map experimental info   TCA-ACETONE-PHENOL_3 MAP LOCATIONS: SPOT 56: pI=6.27; Mw=46590   [identification data] IDENTIFICATION: SPOT 56: SeqCov=20%. Mascot (Protein score/CI%=84/99.99) [1]. MAPPING (identification): SPOT 56: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Jesus V. Jorrin-Novo, University of Cordoba, Spain Cross-references UniProtKB/TrEMBL Q94C61; Q94C61_ARATH. World-2DPAGE Repository Q94C61; Q94C61_ARATH. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/TrEMBL Extracted from UniProtKB/TrEMBL, release: 2011_10 Entry name Q94C61_ARATH Primary accession number Q94C61 Sequence was last modified on  December 1, 2001 (version 1) Annotations were last modified on  September 21, 2011 (version 63) Name and origin of the protein Description SubName: Full=Putative chromatin remodelling complex ATPase chain ISWI; Gene name Name=At5g18620 Encoded on Name=At5g18620 Keywords Name=At5g18620. Cross-references EMBL AY035159; AAK59663.1; -; mRNA IPI IPI00526463; -; . HSSP Q24368; 1OFC; . ProteinModelPortal Q94C61; -; . STRING Q94C61; -; . World-2DPAGE 0003:Q94C61; -; . PRIDE Q94C61; -; . EnsemblPlants AT5G18620.1; AT5G18620.1; AT5G18620; . GenomeReviews BA000015_GR; AT5G18620; . GeneTree EPGT00050000004921; -; . HOGENOM HBG717285; -; . PhylomeDB Q94C61; -; . ArrayExpress Q94C61; -; . Genevestigator Q94C61; -; . GO GO:0016585; C:chromatin remodeling complex; IEA:InterPro; . GO GO:0005524; F:ATP binding; IEA:InterPro; . GO GO:0003677; F:DNA binding; IEA:InterPro; . GO GO:0004386; F:helicase activity; IEA:InterPro; . GO GO:0031491; F:nucleosome binding; IEA:InterPro; . GO GO:0043044; P:ATP-dependent chromatin remodeling; IEA:InterPro; . InterPro IPR015194; ATPase_nucl-remodel_HAND-dom; . InterPro IPR001650; Helicase_C; . InterPro IPR009057; Homeodomain-like; . InterPro IPR001005; SANT_DNA-bd; . InterPro IPR017884; SANT_eukarya; . InterPro IPR015195; SLIDE; . Pfam PF09110; HAND; 1; . Pfam PF00271; Helicase_C; 1; . Pfam PF09111; SLIDE; 1; . SMART SM00490; HELICc; 1; . SMART SM00717; SANT; 2; . SUPFAM SSF46689; Homeodomain_like; 2; . SUPFAM SSF101224; Nucl_remodel_ATPase_ISWI_HAND; 1; . PROSITE PS51194; HELICASE_CTER; 1; . PROSITE PS51293; SANT; 1; . World-2DPAGE Repository (search AC)