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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0021]' for entry matching: Q9Z2X1 World-2DPAGE Repository (0021):  Q9Z2X1 Q9Z2X1 General information about the entry View entry in simple text format Entry name HNRPF_MOUSE Primary accession number Q9Z2X1 integrated into World-2DPAGE Repository (0021) on  June 9, 2010 (release 1) 2D Annotations were last modified on June 20, 2011 (version 2) General Annotations were last modified on  November 30, 2011 (version 2) Name and origin of the protein Description RecName: Full=Heterogeneous nuclear ribonucleoprotein F; Short=hnRNP F; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;. Gene name Name=Hnrnpf Synonyms=Hnrpf Annotated species Mus musculus (Mouse) [TaxID: 10090] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus. References [1]   2D-PAGE GEL CHARACTERIZATION De Cegli R., Romito A., Iacobacci S., Mao L., Lauria M., Fedele A.O., Klose J., Borel C., Descombes P., Antonarakis S.E., Di Bernardo D., Banfi S., Ballabio A., Cobellis G. ''A mouse Embryonic Stem Cell Bank for inducible overexpression of human Chromosome 21 genes'' Genome Biol 11(6):R64 (2010) 2D PAGE maps for identified proteins How to interpret a protein RUNX1_DAY7 {Mouse embryonic stem cells overexpressing Runx1, Day 7} Mus musculus (Mouse) Tissue: Embryonic stem cell   map experimental info   RUNX1_DAY7 MAP LOCATIONS: SPOT 2612: pI=5.31; Mw=45700   [identification data] EXPRESSION: SPOT 2612: Protein ratio 48h/0h=0.78 [1]. IDENTIFICATION: SPOT 2612: Mascot Protein score=463. SeqCov=22%. Peptides identified=8 [1]. MAPPING (identification): SPOT 2612: Tandem mass spectrometry [1]. Copyright Data from Dr. Lei Mao, Institute of Human Genetics, Charite Universitaetsmedizin Berlin, Germany Cross-references UniProtKB/Swiss-Prot Q9Z2X1; HNRPF_MOUSE. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name HNRPF_MOUSE Primary accession number Q9Z2X1 Secondary accession number(s) Q5FWK2 Q8BVU8 Q8K2U9 Q8R0E7 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  November 16, 2011 (version 108) Name and origin of the protein Description RecName: Full=Heterogeneous nuclear ribonucleoprotein F; Short=hnRNP F; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein F, N-terminally processed; Gene name Name=Hnrnpf Synonyms=Hnrpf Encoded on Name=Hnrnpf; Synonyms=Hnrpf Keywords 3D-structure; Acetylation; Alternative splicing; Complete proteome; Isopeptide bond; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding; Spliceosome; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AK076478; BAC36361.1; ALT_SEQ; mRNA EMBL BC018185; AAH18185.1; -; mRNA EMBL BC025481; AAH25481.1; -; mRNA EMBL BC027003; AAH27003.1; ALT_INIT; mRNA EMBL BC029163; AAH29163.1; -; mRNA EMBL BC029764; AAH29764.1; ALT_INIT; mRNA EMBL BC033483; AAH33483.1; -; mRNA EMBL BC089313; AAH89313.1; -; mRNA IPI IPI00226073; -; . IPI IPI00798511; -; . RefSeq NP_001159899.1; NM_001166427.1; . RefSeq NP_001159900.1; NM_001166428.1; . RefSeq NP_001159901.1; NM_001166429.1; . RefSeq NP_001159902.1; NM_001166430.1; . RefSeq NP_001159903.1; NM_001166431.1; . RefSeq NP_001159904.1; NM_001166432.1; . RefSeq NP_598595.1; NM_133834.2; . UniGene Mm.422979; -; . UniGene Mm.476420; -; . PDB 2DB1; NMR; -; A=1-105 PDBsum 2DB1; -; . ProteinModelPortal Q9Z2X1; -; . SMR Q9Z2X1; 1-194; 277-381; . IntAct Q9Z2X1; 3; . STRING Q9Z2X1; -; . PhosphoSite Q9Z2X1; -; . REPRODUCTION-2DPAGE Q9Z2X1; -; . PRIDE Q9Z2X1; -; . Ensembl ENSMUST00000035493; ENSMUSP00000045048; ENSMUSG00000042079; . Ensembl ENSMUST00000163168; ENSMUSP00000130023; ENSMUSG00000042079; . Ensembl ENSMUST00000167182; ENSMUSP00000126817; ENSMUSG00000042079; . Ensembl ENSMUST00000167657; ENSMUSP00000125911; ENSMUSG00000042079; . Ensembl ENSMUST00000170346; ENSMUSP00000130844; ENSMUSG00000042079; . GeneID 98758; -; . KEGG mmu:98758; -; . UCSC uc009dle.2; mouse; . CTD 3185; -; . MGI MGI:2138741; Hnrnpf; . eggNOG roNOG06834; -; . GeneTree ENSGT00550000074195; -; . HOGENOM HBG447282; -; . HOVERGEN HBG055557; -; . InParanoid Q9Z2X1; -; . OMA SDCTIRD; -; . OrthoDB EOG4CRM03; -; . PhylomeDB Q9Z2X1; -; . NextBio 353639; -; . Bgee Q9Z2X1; -; . Genevestigator Q9Z2X1; -; . GermOnline ENSMUSG00000042079; Mus musculus; . GO GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell; . GO GO:0000166; F:nucleotide binding; IEA:InterPro; . GO GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB; . GO GO:0006397; P:mRNA processing; IEA:UniProtKB-KW; . GO GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB; . GO GO:0008380; P:RNA splicing; IEA:UniProtKB-KW; . InterPro IPR012677; Nucleotide-bd_a/b_plait; . InterPro IPR000504; RRM_dom; . InterPro IPR012996; Znf_CHHC; . Gene3D G3DSA:3.30.70.330; a_b_plait_nuc_bd; 3; . KO K12898; -; . Pfam PF00076; RRM_1; 2; . Pfam PF08080; zf-RNPHF; 1; . SMART SM00360; RRM; 3; . PROSITE PS50102; RRM; 3; . World-2DPAGE Repository (search AC)