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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0021]' for entry matching: RD23B_MOUSE World-2DPAGE Repository (0021):  RD23B_MOUSE RD23B_MOUSE General information about the entry View entry in simple text format Entry name RD23B_MOUSE Primary accession number P54728 integrated into World-2DPAGE Repository (0021) on  June 9, 2010 (release 1) 2D Annotations were last modified on June 20, 2011 (version 2) General Annotations were last modified on  November 30, 2011 (version 2) Name and origin of the protein Description RecName: Full=UV excision repair protein RAD23 homolog B; Short=HR23B; Short=mHR23B; AltName: Full=XP-C repair-complementing complex 58 kDa protein; Short=p58;. Gene name Name=Rad23b Synonyms=Mhr23b Annotated species Mus musculus (Mouse) [TaxID: 10090] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus. References [1]   2D-PAGE GEL CHARACTERIZATION De Cegli R., Romito A., Iacobacci S., Mao L., Lauria M., Fedele A.O., Klose J., Borel C., Descombes P., Antonarakis S.E., Di Bernardo D., Banfi S., Ballabio A., Cobellis G. ''A mouse Embryonic Stem Cell Bank for inducible overexpression of human Chromosome 21 genes'' Genome Biol 11(6):R64 (2010) 2D PAGE maps for identified proteins How to interpret a protein RUNX1_DAY7 {Mouse embryonic stem cells overexpressing Runx1, Day 7} Mus musculus (Mouse) Tissue: Embryonic stem cell   map experimental info   RUNX1_DAY7 MAP LOCATIONS: SPOT 2458: pI=4.77; Mw=43490   [identification data] EXPRESSION: SPOT 2458: Protein ratio 48h/0h=0.77 [1]. IDENTIFICATION: SPOT 2458: Mascot Protein score=583. SeqCov=19%. Peptides identified=34 [1]. MAPPING (identification): SPOT 2458: Tandem mass spectrometry [1]. Copyright Data from Dr. Lei Mao, Institute of Human Genetics, Charite Universitaetsmedizin Berlin, Germany Cross-references UniProtKB/Swiss-Prot P54728; RD23B_MOUSE. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name RD23B_MOUSE Primary accession number P54728 Secondary accession number(s) Q3TUA4 Sequence was last modified on  July 27, 2011 (version 2) Annotations were last modified on  November 16, 2011 (version 100) Name and origin of the protein Description RecName: Full=UV excision repair protein RAD23 homolog B; Short=HR23B; Short=mHR23B; AltName: Full=XP-C repair-complementing complex 58 kDa protein; Short=p58; Gene name Name=Rad23b Synonyms=Mhr23b Encoded on Name=Rad23b; Synonyms=Mhr23b Keywords 3D-structure; Acetylation; Complete proteome; Cytoplasm; DNA damage; DNA repair; Nucleus; Phosphoprotein; Proteasome; Reference proteome; Repeat; Ubl conjugation pathway. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X92411; CAA63146.1; -; mRNA EMBL AK150089; BAE29298.1; -; mRNA EMBL AK160880; BAE36067.1; -; mRNA EMBL AK160890; BAE36071.1; -; mRNA EMBL AK160973; BAE36124.1; -; mRNA EMBL AL683890; CAM13976.1; -; Genomic_DNA EMBL BC027747; AAH27747.1; -; mRNA IPI IPI00108774; -; . RefSeq NP_033037.2; NM_009011.4; . UniGene Mm.196846; -; . PDB 2F4M; X-ray; 1.85 A; B=273-332 PDB 2F4O; X-ray; 2.26 A; B=273-332 PDBsum 2F4M; -; . PDBsum 2F4O; -; . ProteinModelPortal P54728; -; . SMR P54728; 1-416; . IntAct P54728; 2; . STRING P54728; -; . PhosphoSite P54728; -; . PRIDE P54728; -; . Ensembl ENSMUST00000030134; ENSMUSP00000030134; ENSMUSG00000028426; . GeneID 19359; -; . KEGG mmu:19359; -; . MGI MGI:105128; Rad23b; . eggNOG roNOG07444; -; . HOGENOM HBG738030; -; . HOVERGEN HBG055042; -; . InParanoid P54728; -; . OrthoDB EOG4M399F; -; . PhylomeDB P54728; -; . ArrayExpress P54728; -; . Bgee P54728; -; . CleanEx MM_RAD23B; -; . Genevestigator P54728; -; . GermOnline ENSMUSG00000028426; Mus musculus; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; . GO GO:0000502; C:proteasome complex; IEA:UniProtKB-KW; . GO GO:0071942; C:XPC complex; ISS:UniProtKB; . GO GO:0003684; F:damaged DNA binding; IEA:InterPro; . GO GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro; . GO GO:0007283; P:spermatogenesis; IMP:MGI; . InterPro IPR004806; Rad23; . InterPro IPR006636; STI1_HS-bd; . InterPro IPR009060; UBA-like; . InterPro IPR000449; UBA/transl_elong_EF1B_N; . InterPro IPR015940; UBA/transl_elong_EF1B_N_euk; . InterPro IPR000626; Ubiquitin; . InterPro IPR019955; Ubiquitin_supergroup; . InterPro IPR015360; XPC-bd; . Gene3D G3DSA:1.10.10.540; XPC-bd; 1; . KO K10839; -; . Pfam PF00627; UBA; 2; . Pfam PF00240; ubiquitin; 1; . Pfam PF09280; XPC-binding; 1; . PRINTS PR01839; RAD23PROTEIN; . SMART SM00727; STI1; 1; . SMART SM00165; UBA; 2; . SMART SM00213; UBQ; 1; . SUPFAM SSF46934; UBA_like; 2; . SUPFAM SSF101238; XPC-bd; 1; . TIGRFAMs TIGR00601; Rad23; 1; . PROSITE PS50030; UBA; 2; . PROSITE PS00299; UBIQUITIN_1; FALSE_NEG; . PROSITE PS50053; UBIQUITIN_2; 1; . World-2DPAGE Repository (search AC)