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World-2DPAGE Repository

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Searching in 'World-2DPAGE Repository [0004]' for entry matching: ROA2_RAT

World-2DPAGE Repository (0004):  ROA2_RAT


General information about the entry
View entry in simple text format
Entry nameROA2_RAT
Primary accession numberA7VJC3
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1; Short=hnRNP A2/B1;.
Gene nameName=Hnrnpa2b1
Synonyms=Hnrnp, Hnrpa2b1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
  map experimental info

pI=7.33; Mw=38000  [identification data]

MAPPING (identification):
SPOT 518: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtA7VJC2; ROA2_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameROA2_RAT
Primary accession numberA7VJC2
Secondary accession number(s) A7VJC1 A7VJC3 A7VJC4
Sequence was last modified on October 23, 2007 (version 1)
Annotations were last modified on November 16, 2011 (version 39)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1; Short=hnRNP A2/B1;
Gene nameName=Hnrnpa2b1
Synonyms=Hnrnp, Hnrpa2b1
Encoded onName=Hnrnpa2b1; Synonyms=Hnrnp, Hnrpa2b1
KeywordsAcetylation; Alternative splicing; Complete proteome; Cytoplasm; Methylation; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding; Spliceosome.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLAB006815; BAF79675.1; -; mRNA
EMBLAB006816; BAF79676.1; -; mRNA
EMBLAB006817; BAF79677.1; -; mRNA
EMBLAB006818; BAF79678.1; -; mRNA
IPIIPI00212969; -; .
IPIIPI00867934; -; .
IPIIPI00923129; -; .
IPIIPI00923135; -; .
RefSeqNP_001098083.1; NM_001104613.1; .
UniGeneRn.4057; -; .
ProteinModelPortalA7VJC2; -; .
SMRA7VJC2; 1-193; .
GeneID362361; -; .
KEGGrno:362361; -; .
CTD3181; -; .
RGD1310403; Hnrnpa2b1; .
eggNOGmaNOG08914; -; .
GeneTreeENSGT00540000069937; -; .
HOVERGENHBG108415; -; .
InParanoidA7VJC2; -; .
OrthoDBEOG4HQDKF; -; .
NextBio679650; -; .
GenevestigatorA7VJC2; -; .
GOGO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; .
GOGO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell; .
GOGO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0003723; F:RNA binding; IEA:UniProtKB-KW; .
GOGO:0006397; P:mRNA processing; IEA:UniProtKB-KW; .
GOGO:0008380; P:RNA splicing; IEA:UniProtKB-KW; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
Gene3DG3DSA:; a_b_plait_nuc_bd; 1; .
KOK13158; -; .
PfamPF00076; RRM_1; 2; .
SMARTSM00360; RRM; 2; .
PROSITEPS50102; RRM; 2; .

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World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server