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Searching in 'World-2DPAGE Repository [0054]' for entry matching: SARNP_HUMAN




World-2DPAGE Repository (0054):  SARNP_HUMAN


SARNP_HUMAN


General information about the entry
View entry in simple text format
Entry nameSARNP_HUMAN
Primary accession numberP82979
integrated into World-2DPAGE Repository (0054) on November 28, 2012 (release 1)
2D Annotations were last modified onNovember 28, 2012 (version 1)
General Annotations were last modified on October 23, 2014 (version 2)
Name and origin of the protein
DescriptionRecName: Full=SAP domain-containing ribonucleoprotein; AltName: Full=Cytokine-induced protein of 29 kDa; AltName: Full=Nuclear protein Hcc-1; AltName: Full=Proliferation-associated cytokine-inducible protein CIP29;.
Gene nameName=SARNP
Synonyms=HCC1
ORFNames=HSPC316
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
DOI=10.1074/mcp.M112.022947;
Vernocchi S., Battello N., Schmitz S., Revets D., Billing A.M., Turner J.D., Muller C.P.
''Membrane glucocorticoid receptor activation induces proteomic changes aligning with classical glucocorticoid-effects''
Molecular & Cellular Proteomics 12(7):1764-1779 (2013)
2D PAGE maps for identified proteins
How to interpret a protein

HSAPIENS_CCRF-CEM_3-10 {CCRF-CEM cells stimulated with Cort-BSA (internal standard)}
Homo sapiens (Human)
HSAPIENS_CCRF-CEM_3-10
  map experimental info
 
HSAPIENS_CCRF-CEM_3-10

MAP LOCATIONS:
pI=6.12; Mw=23540  [identification data]

%COV: SPOT 962: 57 [1].
SCORE: SPOT 962: 294 [1].
SEARCH ENGINE: SPOT 962: Mascot [1].
MAPPING (identification):
SPOT 962: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Claude P. Muller, Centre de Recherche Public de la Sante / National Public Health Laboratory, Luxembourg
Cross-references
UniProtKB/Swiss-ProtP82979; SARNP_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameSARNP_HUMAN
Primary accession numberP82979
Secondary accession number(s) A8K393 Q9P066
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on October 1, 2014 (version 129)
Name and origin of the protein
DescriptionRecName: Full=SAP domain-containing ribonucleoprotein; AltName: Full=Cytokine-induced protein of 29 kDa; AltName: Full=Nuclear protein Hcc-1; AltName: Full=Proliferation-associated cytokine-inducible protein CIP29;
Gene nameName=SARNP
Synonyms=HCC1
ORFNames=HSPC316
Encoded onName=SARNP; Synonyms=HCC1; ORFNames=HSPC316
Keywords3D-structure; Acetylation; Complete proteome; Direct protein sequencing; DNA-binding; mRNA transport; Nucleus; Reference proteome; RNA-binding; Transcription; Transcription regulation; Translation regulation; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAJ409089; CAC37950.1; -; Genomic_DNA
EMBLAF486281; AAM09686.1; -; mRNA
EMBLAF161434; AAF28994.1; ALT_SEQ; mRNA
EMBLAK290508; BAF83197.1; -; mRNA
EMBLCH471054; EAW96838.1; -; Genomic_DNA
EMBLBC007099; AAH07099.1; -; mRNA
CCDSCCDS8892.1; -; .
PIRJC7830; JC7830; .
RefSeqNP_149073.1; NM_033082.3; .
UniGeneHs.505676; -; .
PDB2DO1; NMR; -; A=6-47
PDBsum2DO1; -; .
ProteinModelPortalP82979; -; .
SMRP82979; 6-47; .
BioGrid124049; 40; .
IntActP82979; 5; .
MINTMINT-5008704; -; .
STRING9606.ENSP00000337632; -; .
PhosphoSiteP82979; -; .
DMDM18202440; -; .
MaxQBP82979; -; .
PaxDbP82979; -; .
PRIDEP82979; -; .
DNASU84324; -; .
EnsemblENST00000336133; ENSP00000337632; ENSG00000205323; .
EnsemblENST00000546604; ENSP00000449409; ENSG00000205323; .
GeneID84324; -; .
KEGGhsa:84324; -; .
UCSCuc001sht.3; human; .
CTD84324; -; .
GeneCardsGC12M056146; -; .
HGNCHGNC:24432; SARNP; .
HPAHPA030902; -; .
HPAHPA030903; -; .
MIM610049; gene; .
neXtProtNX_P82979; -; .
PharmGKBPA165513309; -; .
eggNOGNOG290157; -; .
HOGENOMHOG000013054; -; .
InParanoidP82979; -; .
OrthoDBEOG7J9VRJ; -; .
PhylomeDBP82979; -; .
TreeFamTF319843; -; .
ChiTaRSSARNP; human; .
EvolutionaryTraceP82979; -; .
GeneWikiCIP29; -; .
GenomeRNAi84324; -; .
NextBio74056; -; .
PROPR:P82979; -; .
ArrayExpressP82979; -; .
BgeeP82979; -; .
GenevestigatorP82979; -; .
GOGO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA; .
GOGO:0016607; C:nuclear speck; IDA:UniProtKB; .
GOGO:0005634; C:nucleus; NAS:UniProtKB; .
GOGO:0000346; C:transcription export complex; IDA:UniProtKB; .
GOGO:0003677; F:DNA binding; IEA:UniProtKB-KW; .
GOGO:0044822; F:poly(A) RNA binding; IDA:UniProtKB; .
GOGO:0006406; P:mRNA export from nucleus; IDA:UniProtKB; .
GOGO:0006355; P:regulation of transcription; DNA-templated; IEA:UniProtKB-KW
GOGO:0006417; P:regulation of translation; IEA:UniProtKB-KW; .
GOGO:0006351; P:transcription; DNA-templated; IEA:UniProtKB-KW
Gene3D1.10.720.30; -; 1; .
InterProIPR003034; SAP_dom; .
PfamPF02037; SAP; 1; .
SMARTSM00513; SAP; 1; .
PROSITEPS50800; SAP; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server