resource logo

World-2DPAGE Repository

Attention: World-2DPAGE is no longer maintained.
It will be discontinued on 31-May-2024.

Swiss-2DPAGE data (text records and image files) will continue to be available from

World-2DPAGE Repository no longer accepts submissions.

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]


use 'Ctrl' to select several

Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal

Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0030]' for entry matching: SODC_RAT

World-2DPAGE Repository (0030):  SODC_RAT


General information about the entry
View entry in simple text format
Entry nameSODC_RAT
Primary accession numberP07632
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Superoxide dismutase [Cu-Zn]; EC=;.
Gene nameName=Sod1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
  map experimental info

pI=5.89; Mw=15780  [identification data]

IDENTIFICATION: SPOT 2814: Mascot protein score=459. Number of peptides=6 [1].
MAPPING (identification):
SPOT 2814: Tandem mass spectrometry [1].

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
UniProtKB/Swiss-ProtP07632; SODC_RAT.
World-2DPAGE RepositoryP07632; SODC_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameSODC_RAT
Primary accession numberP07632
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on November 16, 2011 (version 118)
Name and origin of the protein
DescriptionRecName: Full=Superoxide dismutase [Cu-Zn]; EC=;
Gene nameName=Sod1
Encoded onName=Sod1
KeywordsAcetylation; Antioxidant; Complete proteome; Copper; Cytoplasm; Direct protein sequencing; Disulfide bond; Metal-binding; Oxidoreductase; Phosphoprotein; Reference proteome; Zinc.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLY00404; CAA68465.1; -; mRNA
EMBLM25157; AAA42160.1; ALT_INIT; mRNA
EMBLX05634; CAA29121.1; -; mRNA
EMBLZ21917; CAA79925.1; ALT_INIT; Genomic_DNA
EMBLZ21918; CAA79925.1; JOINED; Genomic_DNA
EMBLZ21919; CAA79925.1; JOINED; Genomic_DNA
EMBLZ21920; CAA79925.1; JOINED; Genomic_DNA
EMBLBC082800; AAH82800.1; -; mRNA
IPIIPI00231643; -; .
PIRJC1192; JC1192; .
RefSeqNP_058746.1; NM_017050.1; .
UniGeneRn.6059; -; .
ProteinModelPortalP07632; -; .
SMRP07632; 2-154; .
MINTMINT-6612994; -; .
STRINGP07632; -; .
PhosphoSiteP07632; -; .
Rat-heart-2DPAGEP07632; -; .
PRIDEP07632; -; .
EnsemblENSRNOT00000002885; ENSRNOP00000002885; ENSRNOG00000002115; .
GeneID24786; -; .
KEGGrno:24786; -; .
UCSCNM_017050; rat; .
CTD6647; -; .
RGD3731; Sod1; .
eggNOGroNOG15892; -; .
HOVERGENHBG000062; -; .
OrthoDBEOG45HRZM; -; .
PhylomeDBP07632; -; .
NextBio604408; -; .
ArrayExpressP07632; -; .
GenevestigatorP07632; -; .
GermOnlineENSRNOG00000002115; Rattus norvegicus; .
GOGO:0031410; C:cytoplasmic vesicle; ISS:UniProtKB; .
GOGO:0005829; C:cytosol; ISS:UniProtKB; .
GOGO:0032839; C:dendrite cytoplasm; ISS:UniProtKB; .
GOGO:0031012; C:extracellular matrix; ISS:UniProtKB; .
GOGO:0005615; C:extracellular space; ISS:UniProtKB; .
GOGO:0005739; C:mitochondrion; ISS:UniProtKB; .
GOGO:0043025; C:neuronal cell body; ISS:UniProtKB; .
GOGO:0005634; C:nucleus; ISS:UniProtKB; .
GOGO:0005777; C:peroxisome; IDA:UniProtKB; .
GOGO:0043234; C:protein complex; ISS:UniProtKB; .
GOGO:0051087; F:chaperone binding; ISS:UniProtKB; .
GOGO:0005507; F:copper ion binding; ISS:UniProtKB; .
GOGO:0030346; F:protein phosphatase 2B binding; ISS:UniProtKB; .
GOGO:0004784; F:superoxide dismutase activity; ISS:UniProtKB; .
GOGO:0008270; F:zinc ion binding; ISS:UniProtKB; .
GOGO:0000187; P:activation of MAPK activity; ISS:UniProtKB; .
GOGO:0006916; P:anti-apoptosis; IMP:RGD; .
GOGO:0060088; P:auditory receptor cell stereocilium organization; ISS:UniProtKB; .
GOGO:0007569; P:cell aging; ISS:UniProtKB; .
GOGO:0006879; P:cellular iron ion homeostasis; ISS:UniProtKB; .
GOGO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; ISS:UniProtKB; .
GOGO:0006302; P:double-strand break repair; ISS:UniProtKB; .
GOGO:0007566; P:embryo implantation; ISS:UniProtKB; .
GOGO:0006749; P:glutathione metabolic process; ISS:UniProtKB; .
GOGO:0060047; P:heart contraction; ISS:UniProtKB; .
GOGO:0050665; P:hydrogen peroxide biosynthetic process; ISS:UniProtKB; .
GOGO:0007626; P:locomotory behavior; ISS:UniProtKB; .
GOGO:0046716; P:muscle cell homeostasis; ISS:UniProtKB; .
GOGO:0002262; P:myeloid cell homeostasis; ISS:UniProtKB; .
GOGO:0045541; P:negative regulation of cholesterol biosynthetic process; ISS:UniProtKB; .
GOGO:0043524; P:negative regulation of neuron apoptosis; ISS:UniProtKB; .
GOGO:0060052; P:neurofilament cytoskeleton organization; ISS:UniProtKB; .
GOGO:0001541; P:ovarian follicle development; ISS:UniProtKB; .
GOGO:0032287; P:peripheral nervous system myelin maintenance; ISS:UniProtKB; .
GOGO:0001819; P:positive regulation of cytokine production; ISS:UniProtKB; .
GOGO:0008217; P:regulation of blood pressure; ISS:UniProtKB; .
GOGO:0051881; P:regulation of mitochondrial membrane potential; ISS:UniProtKB; .
GOGO:0040014; P:regulation of multicellular organism growth; ISS:UniProtKB; .
GOGO:0060087; P:relaxation of vascular smooth muscle; ISS:UniProtKB; .
GOGO:0019430; P:removal of superoxide radicals; ISS:UniProtKB; .
GOGO:0001975; P:response to amphetamine; IEP:RGD; .
GOGO:0048678; P:response to axon injury; ISS:UniProtKB; .
GOGO:0046688; P:response to copper ion; IMP:RGD; .
GOGO:0042493; P:response to drug; ISS:UniProtKB; .
GOGO:0045471; P:response to ethanol; ISS:UniProtKB; .
GOGO:0009408; P:response to heat; ISS:UniProtKB; .
GOGO:0042542; P:response to hydrogen peroxide; ISS:UniProtKB; .
GOGO:0031667; P:response to nutrient levels; IDA:RGD; .
GOGO:0001895; P:retina homeostasis; ISS:UniProtKB; .
GOGO:0007605; P:sensory perception of sound; ISS:UniProtKB; .
GOGO:0007283; P:spermatogenesis; ISS:UniProtKB; .
InterProIPR024134; SOD_Cu/Zn_/chaperones; .
InterProIPR018152; SOD_Cu/Zn_BS; .
InterProIPR001424; SOD_Cu_Zn_dom; .
Gene3DG3DSA:; SOD_Cu_Zn; 1; .
KOK04565; -; .
PANTHERPTHR10003; SOD_Cu_Zn; 1; .
PfamPF00080; Sod_Cu; 1; .
SUPFAMSSF49329; SOD_Cu_Zn; 1; .
PROSITEPS00087; SOD_CU_ZN_1; 1; .
PROSITEPS00332; SOD_CU_ZN_2; 1; .

World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server