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Searching in 'World-2DPAGE Repository [0019]' for entry matching: STXB1_RAT




World-2DPAGE Repository (0019):  STXB1_RAT


STXB1_RAT


General information about the entry
View entry in simple text format
Entry nameSTXB1_RAT
Primary accession numberP61765
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Syntaxin-binding protein 1; AltName: Full=N-Sec1; AltName: Full=Protein unc-18 homolog 1; Short=Unc18-1; AltName: Full=Protein unc-18 homolog A; Short=Unc-18A; AltName: Full=p67; AltName: Full=rbSec1;.
Gene nameName=Stxbp1
Synonyms=Unc18a
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1111/j.1471-4159.2010.06719.x;
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
HIPP_SYNAP
  map experimental info
 
HIPP_SYNAP

MAP LOCATIONS:
pI=6.49; Mw=67925  [identification data]
pI=6.49; Mw=67925  [identification data]

IDENTIFICATION: SPOT 329: Peptides number=9. SeqCov=18.7%. MOWSE score=8.88E+6 [1]
SPOT 330: Peptides number=7. SeqCov=11.6%. MOWSE score=9.02E+3 [1].
MAPPING (identification):
SPOT 329: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 330: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Willard Freeman, Penn State College of Medicine, USA
Cross-references
UniProtKB/Swiss-ProtP61765; STXB1_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameSTXB1_RAT
Primary accession numberP61765
Secondary accession number(s) Q28208 Q62759 Q64320 Q96TG8
Sequence was last modified on June 7, 2004 (version 1)
Annotations were last modified on November 16, 2011 (version 80)
Name and origin of the protein
DescriptionRecName: Full=Syntaxin-binding protein 1; AltName: Full=N-Sec1; AltName: Full=Protein unc-18 homolog 1; Short=Unc18-1; AltName: Full=Protein unc-18 homolog A; Short=Unc-18A; AltName: Full=p67; AltName: Full=rbSec1;
Gene nameName=Stxbp1
Synonyms=Unc18a
Encoded onName=Stxbp1; Synonyms=Unc18a
Keywords3D-structure; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; Membrane; Phosphoprotein; Protein transport; Reference proteome; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLL26087; AAB41113.1; -; mRNA
EMBLL26264; AAA19246.1; -; mRNA
EMBLU06069; AAA17987.1; -; mRNA
EMBLU21116; AAA96350.1; -; mRNA
EMBLBC088850; AAH88850.1; -; mRNA
IPIIPI00205372; -; .
IPIIPI00230938; -; .
PIRA53455; A53455; .
PIRS39345; S39345; .
RefSeqNP_037170.1; NM_013038.3; .
UniGeneRn.80843; -; .
PDB3C98; X-ray; 2.60 A; A=1-594
PDB3PUJ; X-ray; 3.31 A; A/B=1-594
PDBsum3C98; -; .
PDBsum3PUJ; -; .
ProteinModelPortalP61765; -; .
SMRP61765; 4-592; .
DIPDIP-766N; -; .
IntActP61765; 6; .
STRINGP61765; -; .
PhosphoSiteP61765; -; .
World-2DPAGE0004:P61765; -; .
PRIDEP61765; -; .
EnsemblENSRNOT00000021178; ENSRNOP00000021178; ENSRNOG00000015420; .
EnsemblENSRNOT00000021189; ENSRNOP00000021189; ENSRNOG00000015420; .
GeneID25558; -; .
KEGGrno:25558; -; .
UCSCNM_013038; rat; .
CTD6812; -; .
RGD3785; Stxbp1; .
eggNOGmaNOG05047; -; .
GeneTreeENSGT00390000005206; -; .
HOVERGENHBG052710; -; .
OMATEVCPEE; -; .
OrthoDBEOG4K6G3W; -; .
PhylomeDBP61765; -; .
NextBio607135; -; .
ArrayExpressP61765; -; .
GenevestigatorP61765; -; .
GermOnlineENSRNOG00000015420; Rattus norvegicus; .
GOGO:0005829; C:cytosol; TAS:RGD; .
GOGO:0005886; C:plasma membrane; IDA:RGD; .
GOGO:0043234; C:protein complex; IDA:RGD; .
GOGO:0042802; F:identical protein binding; IPI:BHF-UCL; .
GOGO:0019904; F:protein domain specific binding; IDA:RGD; .
GOGO:0019901; F:protein kinase binding; IPI:RGD; .
GOGO:0047485; F:protein N-terminus binding; IDA:RGD; .
GOGO:0017075; F:syntaxin-1 binding; IDA:MGI; .
GOGO:0050821; P:protein stabilization; IDA:MGI; .
GOGO:0015031; P:protein transport; IEA:UniProtKB-KW; .
GOGO:0010807; P:regulation of synaptic vesicle priming; IMP:RGD; .
GOGO:0006904; P:vesicle docking involved in exocytosis; IEA:InterPro; .
InterProIPR001619; Sec1-like; .
KOK15292; -; .
PANTHERPTHR11679; Sec1-like; 1; .
PfamPF00995; Sec1; 1; .
SUPFAMSSF56815; Sec1-like; 1; .



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